The class of prenylated indole alkaloids known as the ambiguines represents a structurally intriguing class of compounds with interesting biological activity including promising antibiotic and anti-fungal properties. Ambiguine E is arguably the most potent of these natural products with a minimum inhibitory concentration (MIC) against Staphylococcus aureus comparable to that of the FDA approved antibiotic gentamicin (1.5 and 1.4 ?g/mL respectively). Perhaps a more fascinating feature of these natural products is their biosynthesis, which is suggested to involve the class of non-heme C?H functionalizing enzymes known as the Rieske-oxygenases. It has been proposed that these enzymes are responsible for the final oxidative diversification among the ambiguines including cyclization, epoxidation, and dihydroxylation. In addition, a novel class of non-heme C?H chlorinating enzymes have been identified as responsible for a late-stage stereoselective sp3 chlorination leading to the chlorine-containing ambiguine natural products. While a synthesis of tetracyclic (+)-ambiguine H was recently reported by Baran and coworkers, a synthesis of any of the pentacyclic ambiguines has not yet been accomplished. We envision that a divergent total synthesis of these densely functionalized indole alkaloids will help elucidate mechanisms for the final Rieske mediated oxidations in addition to exploring the promiscuity of the C?H chlorinating enzymes. In light of this goal, we have completed a synthesis of the pentacyclic core of the ambiguines utilizing a novel strategy in a four-step sequence. The completion of the natural products and subsequent biosynthetic studies are proposed here.

Public Health Relevance

The synthesis of natural products and subsequent studies on their biosynthesis is vital to providing a foundation for the development of novel pharmaceuticals including antibiotics. While the ambiguine class of natural products are promising antibiotics, perhaps even more intriguing is their biosynthesis which involves C?H chlorinating enzymes and C?H activating enzymes known as the Rieske oxygenases. Completion of the synthesis of a common intermediate would allow access to a wide variety of pentacyclic ambiguine natural products and will be used to uncover fascinating aspects of their biosynthesis that should lead to the identification of novel and important bioactivity.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Predoctoral Individual National Research Service Award (F31)
Project #
5F31GM123603-02
Application #
9525874
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Bond, Michelle Rueffer
Project Start
2017-03-14
Project End
2018-08-10
Budget Start
2018-03-14
Budget End
2018-08-10
Support Year
2
Fiscal Year
2018
Total Cost
Indirect Cost
Name
University of California Berkeley
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
124726725
City
Berkeley
State
CA
Country
United States
Zip Code
94704