A simple and practical method is described for harnessing the biosynthetic potential of the erythromycin pathway to generate novel molecules of natural product-like complexity. A genetic block has been introduced in the first condensation step of the polyketide biosynthetic pathway that leads to the formation of 6- deoxyerythronolide B (6-dEB), the macrocyclic precursor of erythromycin. Exogenous addition of designed synthetic molecules to small scale cultures of this null mutant results in highly selective multi-milligram production of unnatural polyketides, including aromatic and ring-expanded variants of 6-dEB. Unexpected incorporation patterns are observed, illustrating the catalytic versatility of modular olyketide synthases. Further processing of some of these scaffolds by post-polyketide enzymes of the erythromycin pathway results in the general of novel antibacterials with comparable in vitro potency to their natural counterparts. This method should be applicable to other biologically and medicinally interesting polyketide natural products with minimal, and possibly even no, biosynthetic information at the genetic level.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Postdoctoral Individual National Research Service Award (F32)
Project #
5F32GM018590-02
Application #
2654916
Study Section
Bio-Organic and Natural Products Chemistry Study Section (BNP)
Project Start
1998-01-20
Project End
Budget Start
1998-01-20
Budget End
1998-05-31
Support Year
2
Fiscal Year
1998
Total Cost
Indirect Cost
Name
Stanford University
Department
Engineering (All Types)
Type
Schools of Engineering
DUNS #
800771545
City
Stanford
State
CA
Country
United States
Zip Code
94305
Jacobsen, J R; Cane, D E; Khosla, C (1998) Spontaneous priming of a downstream module in 6-deoxyerythronolide B synthase leads to polyketide biosynthesis. Biochemistry 37:4928-34
Jacobsen, J R; Keatinge-Clay, A T; Cane, D E et al. (1998) Precursor-directed biosynthesis of 12-ethyl erythromycin. Bioorg Med Chem 6:1171-7