While there have been advances in targeting actionable oncogenes such as ALK fusion proteins, the majority of non-small cell lung cancer patients feature either difficult to target mutations, e.g. KRAS, or lack known oncogenic drivers. These patients do not derive much benefit from currently approved therapies. Therefore, in order to find effective treatments for these patients, novel strategies need to be implemented to find therapies that are able to kill lung cancer cells and can be rapidly implemented clinically. Many targeted drugs show potent anticancer activity in subsets of NSCLC, which is often unrelated to inhibition of the cognate targets of these drugs. These beneficial off-targets can be exploited to identify novel drug repurposing opportunities that allow for the treatment of these difficult to treat cancers. Detailed drug profiling is best done using unbiased chemical and systems biology approaches. Chemical proteomic experiments investigate direct drug-protein interactomes giving a number of possible candidate targets. These interactomes can be integrated with global signaling changes measured by phosphoproteomics to give a comprehensive view of the mechanism of action of a drug. Ceritinib is an FDA-approved ALK/IGF1R inhibitor for the treatment of ALK positive non-small cell lung cancer (NSCLC) and we observed that ceritinib has unexpected activity in KRAS mutant NSCLC. A focused chemical proteomic profiling of ceritinib has identified a number of novel targets of ceritinib including FAK1 and RSK1/2. Preliminary studies into ceritinib?s mechanism of action have shown alterations in the cross talk signaling between the KRAS and RHOA pathways. However, the functional relevance and exact molecular mechanisms of such regulation remain unclear. Finally, based on this mechanism we designed a novel drug combination strategy combining ceritinib with the FDA-approved tubulin inhibitor, paclitaxel. We will test the hypothesis that the molecular determinants following inhibition of FAK1 and RSK1/2 by ceritinib carry predictive ability for ceritinib and paclitaxel combination efficacy by achieving the following aims.
Aim 2. 1: To evaluate the role of YB1 in the observed synergy between ceritinib and paclitaxel.
Aim 2. 2: To investigate the role of GEF-H1 in ceritinib?s mechanism of action.
Aim 2. 3: To characterize both ceritinib monotherapy and paclitaxel combination therapy in KRAS-mutant NSCLC PDX models. We will then have a greater understanding of the relevant downstream molecular determinants of ceritinib?s mechanism of action and of the observed synergy with paclitaxel. This will ultimately lead to predictive capabilities for ceritinib sensitivity and further clinical development of ceritinib to treat patients whom will benefit.

Public Health Relevance

Ceritinib is a targeted drug that has been FDA-approved for the treatment of ALK-positive non-small cell lung cancer. We have recently observed ceritinib has efficacy outside of ALK-positive non-small cell lung cancer. This project focuses on elucidating ceritinib?s mechanism of action in ALK-negative non-small cell lung cancer and investigates a novel drug combination based on the identified mechanism of action.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Project #
1F99CA212456-01
Application #
9229836
Study Section
Special Emphasis Panel (ZCA1-RTRB-R (A1))
Program Officer
Mcguirl, Michele
Project Start
2016-09-19
Project End
2018-08-31
Budget Start
2016-09-19
Budget End
2017-08-31
Support Year
1
Fiscal Year
2016
Total Cost
$35,356
Indirect Cost
Name
University of South Florida
Department
Miscellaneous
Type
Organized Research Units
DUNS #
069687242
City
Tampa
State
FL
Country
United States
Zip Code
33612
Ctortecka, Claudia; Palve, Vinayak; Kuenzi, Brent M et al. (2018) Functional Proteomics and Deep Network Interrogation Reveal a Complex Mechanism of Action of Midostaurin in Lung Cancer Cells. Mol Cell Proteomics 17:2434-2447
Verduzco, Daniel; Kuenzi, Brent M; Kinose, Fumi et al. (2018) Ceritinib Enhances the Efficacy of Trametinib in BRAF/NRAS-Wild-Type Melanoma Cell Lines. Mol Cancer Ther 17:73-83
Mishall, Katie M; Beadnell, Thomas C; Kuenzi, Brent M et al. (2017) Sustained activation of the AKT/mTOR and MAP kinase pathways mediate resistance to the Src inhibitor, dasatinib, in thyroid cancer. Oncotarget 8:103014-103031
Kuenzi, Brent M; Remsing Rix, Lily L; Stewart, Paul A et al. (2017) Polypharmacology-based ceritinib repurposing using integrated functional proteomics. Nat Chem Biol 13:1222-1231
Kuenzi, Brent M; Borne, Adam L; Li, Jiannong et al. (2016) APOSTL: An Interactive Galaxy Pipeline for Reproducible Analysis of Affinity Proteomics Data. J Proteome Res 15:4747-4754