Mendelian mutations, common risk factors, and ? more recently ? rare risk-associated variants have been identified in neurodegenerative dementia. Yet, a significant proportion of the heritability for Alzheimer's Disease (AD) and Frontotemporal Dementia (FTD) remains unexplained, strongly suggesting that additional genetic risk factors await to be identified. Over the past 9 years, the Genetics Core has supported PPG investigators by 1) collecting and storing DNA and RNA samples from the entire PPG cohort; 2) providing genetic testing for known pathogenic causes of dementia and risk-associated variants; 3) contributing to the discovery of novel genes and novel risk-associated variants; 4) establishing an informatics platform to facilitate data sharing, storage and mining. In this renewal application, we propose to efficiently leverage this infrastructure and expertise, so as to expand the portfolio of genetic and genomics assays available to PPG investigators. We propose to continue sample collection and banking, to expand our sequencing and genotyping efforts to include all the known causes of Mendelian forms of dementia, the top disease susceptibility variants, and genome sequencing in a subset of the PPG cohort. These studies will contribute to a better patient characterization, and pave the way for subject selection and stratification based on genetic profiling in future clinical trials. Given the fundamental nature of genetic information in etiology and pathophysiology of FTD, this Core serves all of the projects in this program and is linked to the other PPG cores.

Public Health Relevance

The Genetics Core will collect biological samples from patients with dementia, and perform genetic and genomic analyses, in collaboration with other Cores and Projects part of this PPG, with the goal of discovering novel disease-causing or risk-associated variants and to facilitate the analysis of these genetic data in conjunction with other clinical and laboratory data, by providing an infrastructure for data storage, mining, and retrieval. These studies will contribute to better patient characterization, and pave the way for subject selection and stratification based on genetic profiling in future clinical trials.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Research Program Projects (P01)
Project #
5P01AG019724-18
Application #
9697727
Study Section
Special Emphasis Panel (ZAG1)
Project Start
Project End
Budget Start
2019-06-01
Budget End
2020-05-31
Support Year
18
Fiscal Year
2019
Total Cost
Indirect Cost
Name
University of California San Francisco
Department
Type
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94118
Ossenkoppele, Rik; Rabinovici, Gil D; Smith, Ruben et al. (2018) Discriminative Accuracy of [18F]flortaucipir Positron Emission Tomography for Alzheimer Disease vs Other Neurodegenerative Disorders. JAMA 320:1151-1162
Mandelli, Maria Luisa; Welch, Ariane E; Vilaplana, Eduard et al. (2018) Altered topology of the functional speech production network in non-fluent/agrammatic variant of PPA. Cortex 108:252-264
Pressman, Peter S; Shdo, Suzanne; Simpson, Michaela et al. (2018) Neuroanatomy of Shared Conversational Laughter in Neurodegenerative Disease. Front Neurol 9:464
Caverzasi, Eduardo; Mandelli, Maria Luisa; Hoeft, Fumiko et al. (2018) Abnormal age-related cortical folding and neurite morphology in children with developmental dyslexia. Neuroimage Clin 18:814-821
Toller, Gianina; Brown, Jesse; Sollberger, Marc et al. (2018) Individual differences in socioemotional sensitivity are an index of salience network function. Cortex 103:211-223
Caplan, Alyssa; Marx, Gabe; Elofson, Jonathan et al. (2018) A case of semantic variant primary progressive aphasia with Pick's pathology. Neurocase 24:90-94
Watson, Christa L; Possin, Katherine; Allen, I Elaine et al. (2018) Visuospatial Functioning in the Primary Progressive Aphasias. J Int Neuropsychol Soc 24:259-268
Brown, Casey L; Lwi, Sandy J; Goodkind, Madeleine S et al. (2018) Empathic Accuracy Deficits in Patients with Neurodegenerative Disease: Association with Caregiver Depression. Am J Geriatr Psychiatry 26:484-493
Geier, Ethan G; Bourdenx, Mathieu; Storm, Nadia J et al. (2018) Rare variants in the neuronal ceroid lipofuscinosis gene MFSD8 are candidate risk factors for frontotemporal dementia. Acta Neuropathol :
Sturm, Virginia E; Brown, Jesse A; Hua, Alice Y et al. (2018) Network Architecture Underlying Basal Autonomic Outflow: Evidence from Frontotemporal Dementia. J Neurosci 38:8943-8955

Showing the most recent 10 out of 607 publications