Modeling prevention interventions requires insights into epidemiological and biological factors affecting HIVtransmission. Project 1 of the proposed Program Project addresses the epidemiological determinants of HIVtransmission by examining the per contact transmission probability (P), the rate of partner change/ contactrate (c), and the duration of infectiousness (D), which all contribute to the reproductive number (R0= pcD),defined as the average number of secondary infections arising from a single infection in a completelysusceptible population. To achieve this objective, we will address the following specific aims:
Aim 1 : Percontact transmission probability (P) - The per contact sexual transmission probability of HIV will beestimated, taking into account stage of HIV infection in the source partner, presence of viral and bacterialsexually transmitted infections, circumcision status, and other biological cofactors investigated in Project 2.The absolute and relative difference of transmission probability for insertive versus receptive anal sex willalso be considered.
Aim 2 : Rate of partner change (c) - The role of partner selection in HIV acquisition andtransmission risk will be examined at individual, partnership, and network levels. At the individual level, therelative contribution of HIV risk due to number of sexual acts versus number of sexual partners will beexamined. At the partnership level, risk characteristics will be compared between transmitting andseroconcordant non-transmitting partnerships. At the network level, risk of acquisition and transmission ofHIV based on the location of individuals within networks of venues used to meet sex partners, andcorrelates of being in a transmission cluster, will be elucidated.
Aim 3 : Duration of infectiousness (D) - Todetermine how duration of the infectious stages of HIV infection intersects with risk behaviors and time toantiretroviral treatment. We will use data from Aims 1-3 to develop a stochastic, individual-based model topredict the number of secondary infections arising from individuals diagnosed during recent HIV infection asthey transit to chronic infection, and the potential impact of short-course antiviral therapy on reducingtransmission. Project 1 depends on well-characterized clinical data and specimens collected by the Clinicaland Specimen Core and the subsequent measurement of transmission correlates in Project 2.Epidemiological data contributing to HIV transmission collected in Project 1 will help to define correlates ofHIV transmission in Project 2. The Administrative Core will coordinate administrative, fiscal, data, andstatistical support for Projects 1 and 2. These data will provide critical information on epidemiologicaldeterminants of HIV transmission in a setting where HIV-1 subtype B predominates, which are lacking forMSM, and will generate important exploratory data for other populations.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Research Program Projects (P01)
Project #
1P01AI074621-01A1
Application #
7468157
Study Section
Special Emphasis Panel (ZAI1-MH-A (S1))
Project Start
2008-03-15
Project End
2013-02-28
Budget Start
2008-03-15
Budget End
2009-02-28
Support Year
1
Fiscal Year
2008
Total Cost
$541,203
Indirect Cost
Name
University of California San Diego
Department
Type
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Chaillon, Antoine; Gianella, Sara; Lada, Steven M et al. (2018) Size, Composition, and Evolution of HIV DNA Populations during Early Antiretroviral Therapy and Intensification with Maraviroc. J Virol 92:
Grebe, Eduard; Welte, Alex; Hall, Jake et al. (2017) Infection Staging and Incidence Surveillance Applications of High Dynamic Range Diagnostic Immuno-Assay Platforms. J Acquir Immune Defic Syndr 76:547-555
Morris, Sheldon R; Zhao, Mitchell; Smith, Davey M et al. (2017) Longitudinal Viral Dynamics in Semen During Early HIV Infection. Clin Infect Dis 64:428-434
Osorio, Georgina; Hoenigl, Martin; Quartarolo, Jennifer et al. (2017) Evaluation of opt-out inpatient HIV screening at an urban teaching hospital. AIDS Care 29:1014-1018
Pines, Heather A; Karris, Maile Y; Little, Susan J (2017) Sexual Partner Concurrency Among Partners Reported by MSM with Recent HIV Infection. AIDS Behav 21:3026-3034
Gianella, Sara; Chaillon, Antoine; Mutlu, Ece A et al. (2017) Effect of cytomegalovirus and Epstein-Barr virus replication on intestinal mucosal gene expression and microbiome composition of HIV-infected and uninfected individuals. AIDS 31:2059-2067
Hoenigl, Martin; Braun, Dominique L; Kouyos, Roger et al. (2017) Evaluation of the Predictive Potential of the Short Acute Retroviral Syndrome Severity Score for HIV-1 Disease Progression in Individuals With Acute HIV Infection. J Acquir Immune Defic Syndr 74:e114-e117
Graves, Susannah K; Little, Susan J; Hoenigl, Martin (2017) Risk profile and HIV testing outcomes of women undergoing community-based testing in San Diego 2008-2014. Sci Rep 7:42183
Green, Nella; Hoenigl, Martin; Chaillon, Antoine et al. (2017) Partner services in adults with acute and early HIV infection. AIDS 31:287-293
Gianella, Sara; Taylor, Jeff; Brown, Timothy R et al. (2017) Can research at the end of life be a useful tool to advance HIV cure? AIDS 31:1-4

Showing the most recent 10 out of 150 publications