The overall function of this core is to provide comprehensive data management and statistical support in a timely and efficient manner to all relevant components of the P-01. This core will process, automate, and edit the clinical, epidemiologic and biologic data derived from specific projects and provide statistical support and expertise to each of the research projects and cores. To support the projects and cores of the P01 we propose four following objectives. The first objective will maintain and further develop a centralized database for clinical, tracking, and genetic data. This objective extends the database that we already created during the previous 5 years of funding. This databases uses Visual Basic front-ends to create user friendly interfaces with a SQL/server backend. Data are converted online into pedigree drawings that are displayed with Progeny Anywhere. Additional database developments will further streamline communication among the P01 projects and facilitate the further analysis of genetic data. Our second objective is to develop and apply novel statistical approaches for the analysis of data relating to core projects. Included in this objective are further developments of software and statistical support for Q-FISH of telomere length (project 5), and support for survival analysis of mouse studies (Project 3). We also will apply and further develop epidemiological tools for project 1. Our third objective is to perform analyses to identify novel genetic factors influencing the risk for cancer in high-risk families. This objective supports projects 1 and 2 and core E. Core C will also develop and apply and develop, where needed, bioinformatics tools to identify novel expression patterns relating to Li- Fraumeni syndrome or Wilms tumor. This objective supports the microarray experiments requested for projects 3 and as needed for project 4 as well as genotyping using microarrays that form a basis for Core D and project 2.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Program Projects (P01)
Project #
5P01CA034936-23
Application #
8066798
Study Section
Subcommittee G - Education (NCI)
Project Start
Project End
2012-09-30
Budget Start
2010-05-01
Budget End
2012-09-30
Support Year
23
Fiscal Year
2010
Total Cost
$383,923
Indirect Cost
Name
University of Texas MD Anderson Cancer Center
Department
Type
DUNS #
800772139
City
Houston
State
TX
Country
United States
Zip Code
77030
Peng, Gang; Bojadzieva, Jasmina; Ballinger, Mandy L et al. (2017) Estimating TP53 Mutation Carrier Probability in Families with Li-Fraumeni Syndrome Using LFSPRO. Cancer Epidemiol Biomarkers Prev 26:837-844
Maturu, Paramahamsa; Jones, Devin; Ruteshouser, E Cristy et al. (2017) Role of Cyclooxygenase-2 Pathway in Creating an Immunosuppressive Microenvironment and in Initiation and Progression of Wilms' Tumor. Neoplasia 19:237-249
Huang, Le; Mokkapati, Sharada; Hu, Qianghua et al. (2016) Nephron Progenitor But Not Stromal Progenitor Cells Give Rise to Wilms Tumors in Mouse Models with ?-Catenin Activation or Wt1 Ablation and Igf2 Upregulation. Neoplasia 18:71-81
Palculict, Timothy Blake; Ruteshouser, E Cristy; Fan, Yu et al. (2016) Identification of germline DICER1 mutations and loss of heterozygosity in familial Wilms tumour. J Med Genet 53:385-8
Liu, Changlu; Ma, Jianzhong; Amos, Christopher I (2015) Bayesian variable selection for hierarchical gene-environment and gene-gene interactions. Hum Genet 134:23-36
Mokkapati, Sharada; Niopek, Katharina; Huang, Le et al. (2014) ?-catenin activation in a novel liver progenitor cell type is sufficient to cause hepatocellular carcinoma and hepatoblastoma. Cancer Res 74:4515-25
Quintás-Cardama, Alfonso; Post, Sean M; Solis, Luisa M et al. (2014) Loss of the novel tumour suppressor and polarity gene Trim62 (Dear1) synergizes with oncogenic Ras in invasive lung cancer. J Pathol 234:108-19
Maturu, Paramahamsa; Overwijk, Willem W; Hicks, John et al. (2014) Characterization of the inflammatory microenvironment and identification of potential therapeutic targets in wilms tumors. Transl Oncol 7:484-92
Shahidul Makki, Mohammad; Cristy Ruteshouser, E; Huff, Vicki (2013) Ubiquitin specific protease 18 (Usp18) is a WT1 transcriptional target. Exp Cell Res 319:612-22
Kaftanovskaya, Elena M; Neukirchner, Giselle; Huff, Vicki et al. (2013) Left-sided cryptorchidism in mice with Wilms' tumour 1 gene deletion in gubernaculum testis. J Pathol 230:39-47

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