Macromolecular Interaction Core (Core D). Paul L. Fox, Ph.D., Core Leader Project Summary/Abstract The Macromolecular Interaction Core has served this Program Project for the last 5 years. The Core serves the common need of all three Projects for investigation of protein-protein and protein-RNA interactions. The principal objective of Core D is to make available robust, state-of-the-art techniques for accurate and reproducible measurement of macromolecular interactions. The Core provides not only access to instrumentation and reagents, but more importantly provides experience and expertise in setting up the methods, and analyzing and interpreting the results. As noted in the Personnel section, Dr. Fox, Core Leader has about 15 years of experience investigating (and publishing on) macromolecular interactions (protein- protein, protein-RNA, protein-DNA) and their role in macrophage inflammatory gene expression and endothelial cell polarization and migration1-18. Dr. Jia, Core Manager, has expertise and proven experience in all of the physical and biochemical methods to be provided by the Core4,6,8-10,12,13. The Macromolecular Interaction Core will provide a diversity of services including provision of reagents, assistance in probe design and construction, design and performance of experiments, and data analysis and interpretation of results. An educational component is a major strength of this Core. All of the methods provided by Core D require technical expertise and experience not generally available in a modern cell or molecular biology laboratory; additionally, some methods require unfamiliar computational analysis methods.

Public Health Relevance

Macromolecular Interaction Core (Core D). Project Narrative The principal objective of Core D is to make available robust, state-of-the-art techniques for accurate and reproducible measurement of macromolecular interactions, particularly protein-protein and protein-RNA interactions. Such measurements are essential for understanding the signaling pathways and metabolic relationships of molecules. Often, defects in these interactions can have pathological consequences. The Macromolecular Interaction Core will provide a diversity of services including provision of reagents, assistance in probe design and construction, design and performance of experiments, and data analysis and interpretation of results. An educational component is a major strength of this Core. All of the methods provided by Core D require technical expertise and experience not generally available in a modern cell or molecular biology laboratory; additionally, some methods require unfamiliar computational analysis methods.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Program Projects (P01)
Project #
5P01HL029582-33
Application #
9171376
Study Section
Special Emphasis Panel (ZHL1)
Program Officer
Hasan, Ahmed a K
Project Start
Project End
Budget Start
2016-11-01
Budget End
2017-10-31
Support Year
33
Fiscal Year
2017
Total Cost
Indirect Cost
Name
Cleveland Clinic Lerner
Department
Type
DUNS #
135781701
City
Cleveland
State
OH
Country
United States
Zip Code
44195
Herjan, Tomasz; Hong, Lingzi; Bubenik, Jodi et al. (2018) IL-17-receptor-associated adaptor Act1 directly stabilizes mRNAs to mediate IL-17 inflammatory signaling. Nat Immunol 19:354-365
Robinet, Peggy; Milewicz, Dianna M; Cassis, Lisa A et al. (2018) Consideration of Sex Differences in Design and Reporting of Experimental Arterial Pathology Studies-Statement From ATVB Council. Arterioscler Thromb Vasc Biol 38:292-303
Zhang, Cun-Jin; Wang, Chenhui; Jiang, Meiling et al. (2018) Act1 is a negative regulator in T and B cells via direct inhibition of STAT3. Nat Commun 9:2745
Han, Juying; Enyindah-Asonye, Gospel; Lin, Feng et al. (2018) CD6 expression has no effect on atherosclerosis in apolipoprotein E-deficient mice. BMC Res Notes 11:229
Sarvestani, Samaneh K; Signs, Steven A; Lefebvre, Veronique et al. (2018) Cancer-predicting transcriptomic and epigenetic signatures revealed for ulcerative colitis in patient-derived epithelial organoids. Oncotarget 9:28717-28730
Arif, Abul; Yao, Peng; Terenzi, Fulvia et al. (2018) The GAIT translational control system. Wiley Interdiscip Rev RNA 9:
Hai, Qimin; Ritchey, Brian; Robinet, Peggy et al. (2018) Quantitative Trait Locus Mapping of Macrophage Cholesterol Metabolism and CRISPR/Cas9 Editing Implicate an ACAT1 Truncation as a Causal Modifier Variant. Arterioscler Thromb Vasc Biol 38:83-91
Eswarappa, Sandeep M; Potdar, Alka A; Sahoo, Sarthak et al. (2018) Metabolic origin of the fused aminoacyl-tRNA synthetase, glutamyl-prolyl-tRNA synthetase. J Biol Chem 293:19148-19156
Halawani, Dalia; Gogonea, Valentin; DiDonato, Joseph A et al. (2018) Structural control of caspase-generated glutamyl-tRNA synthetase by appended noncatalytic WHEP domains. J Biol Chem 293:8843-8860
Zhou, Hao; Bulek, Katarzyna; Li, Xiao et al. (2017) IRAK2 directs stimulus-dependent nuclear export of inflammatory mRNAs. Elife 6:

Showing the most recent 10 out of 276 publications