In the present cycle, we developed a renewable mouse resource for genetic analysis of complex cardiovascular traits. The resource, which we term the Hybrid Mouse Diversity Panel (HMDP), consists of 100 selected inbred strains that have been largely sequenced and that exhibit great diversity in their responses to atherosclerosis. This resource can be used to map complex traits with excellent resolution and to perform pathway analysis using systems genetics .
In Aim 1, we propose to exploit this resource for the analysis of arterial inflammation and intestinal lipid metabolism, the themes of this Program. We will examine higher order genetic interactions using pathway analysis and network modeling to identify novel mechanisms for atherosclerosis in collaboration with the projects in this PPG. We will also create and maintain a systems genetics database for the larger cardiovascular research community.
In Aim 2, we will study in detail a novel regulatory pathway, involving the transcription factor Zhx2, that we identified in the present cycle using a systems genetics approach. Mice carrying a naturally occurring deficiency of Zhx2 expression have a 10-fold to 20-fold reduction in lesion size, and bone marrow transplantation studies indicate that this effect is mediated largely by hematopoietic cells. The mutation does not affect levels of monocytes, but rather promotes macrophage apoptosis, likely involving the NF-B pathway. We will identify the pathways perturbed by Zhx2 deficiency and examine macrophage survival and growth using in vivo labeling and parabiosis experiments.

Public Health Relevance

Our proposal addresses basic mechanisms of lipid metabolism and arterial inflammation using a systems genetics approach. These studies may lead to novel approaches for diagnosis and treatment of atherosclerosis.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Program Projects (P01)
Project #
2P01HL030568-31A1
Application #
8851988
Study Section
Special Emphasis Panel (ZHL1-PPG-N (M1))
Project Start
Project End
Budget Start
2015-07-08
Budget End
2016-04-30
Support Year
31
Fiscal Year
2015
Total Cost
$385,000
Indirect Cost
$135,000
Name
University of California Los Angeles
Department
Type
DUNS #
092530369
City
Los Angeles
State
CA
Country
United States
Zip Code
90095
Jumabay, Medet; Zhumabai, Jiayinaguli; Mansurov, Nurlan et al. (2018) Combined effects of bone morphogenetic protein 10 and crossveinless-2 on cardiomyocyte differentiation in mouse adipocyte-derived stem cells. J Cell Physiol 233:1812-1822
Mangul, Serghei; Yang, Harry Taegyun; Strauli, Nicolas et al. (2018) ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues. Genome Biol 19:36
Mack, Julia J; Iruela-Arispe, M Luisa (2018) NOTCH regulation of the endothelial cell phenotype. Curr Opin Hematol 25:212-218
Beceiro, Susana; Pap, Attila; Czimmerer, Zsolt et al. (2018) LXR nuclear receptors are transcriptional regulators of dendritic cell chemotaxis. Mol Cell Biol :
Sallam, Tamer; Jones, Marius; Thomas, Brandon J et al. (2018) Transcriptional regulation of macrophage cholesterol efflux and atherogenesis by a long noncoding RNA. Nat Med 24:304-312
Skye, Sarah M; Zhu, Weifei; Romano, Kymberleigh A et al. (2018) Microbial Transplantation With Human Gut Commensals Containing CutC Is Sufficient to Transmit Enhanced Platelet Reactivity and Thrombosis Potential. Circ Res 123:1164-1176
Lin, Liang-Yu; Chun Chang, Sunny; O'Hearn, Jim et al. (2018) Systems Genetics Approach to Biomarker Discovery: GPNMB and Heart Failure in Mice and Humans. G3 (Bethesda) 8:3499-3506
Rahmani, Elior; Schweiger, Regev; Shenhav, Liat et al. (2018) BayesCCE: a Bayesian framework for estimating cell-type composition from DNA methylation without the need for methylation reference. Genome Biol 19:141
Chattopadhyay, Arnab; Yang, Xinying; Mukherjee, Pallavi et al. (2018) Treating the Intestine with Oral ApoA-I Mimetic Tg6F Reduces Tumor Burden in Mouse Models of Metastatic Lung Cancer. Sci Rep 8:9032
Hui, Simon T; Kurt, Zeyneb; Tuominen, Iina et al. (2018) The Genetic Architecture of Diet-Induced Hepatic Fibrosis in Mice. Hepatology 68:2182-2196

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