PROJECT 3: Targeting the D4Z4 sequence to enhance repeat repression Abstract FSHD is caused by mutations that decrease the efficiency of D4Z4 repeat-mediated epigenetic repression and result in the low-level variegated mis-expression of DUX4 in skeletal muscle. The broad and long-term goal of this project is to identify components and modulators of the pathways that epigenetically silence D4Z4 repeats that can be exploited to develop a therapy for FSHD, and potentially other human diseases. The major hypothesis of this project is that enhancing the efficiency of repeat-mediated epigenetic repression will suppress DUX4 expression in FSHD muscle and decrease, or reverse, the progression of disease. The specific goal of the project is to identify compounds, their mechanisms of action, and their pre-clinical efficacy in suppressing DUX4 expression in skeletal muscle. This will be accomplished by:
Aim 1, Identify and characterize drug-like compounds that enhance the epigenetic repression of D4Z4 and suppress DUX4 expression;
Aim 2, Determine the pathways and sequences necessary for D4Z4 epigenetic repression;
and Aim 3, perform preclinical development of oligonucleotides to enhance repression of D4Z4 and DUX4 expression. Together these aims will identify compounds, their mechanisms of action, and their pre-clinical efficacy in suppressing DUX4 expression in skeletal muscle. The significance of these studies is that they will identify compounds, their mechanisms of action, and their pre-clinical efficacy in suppressing DUX4 expression in skeletal muscle. The health relatedness is that these studies will provide the basis for future human clinical studies in FSHD.

Agency
National Institute of Health (NIH)
Institute
National Institute of Neurological Disorders and Stroke (NINDS)
Type
Research Program Projects (P01)
Project #
2P01NS069539-06A1
Application #
8998517
Study Section
National Institute of Neurological Disorders and Stroke Initial Review Group (NSD)
Project Start
Project End
Budget Start
2015-09-30
Budget End
2016-09-29
Support Year
6
Fiscal Year
2015
Total Cost
Indirect Cost
Name
Fred Hutchinson Cancer Research Center
Department
Type
DUNS #
078200995
City
Seattle
State
WA
Country
United States
Zip Code
98109
Lemmers, Richard J L F; van der Vliet, Patrick J; Vreijling, Jeroen P et al. (2018) Cis D4Z4 repeat duplications associated with facioscapulohumeral muscular dystrophy type 2. Hum Mol Genet 27:3488-3497
Lim, Jong-Won; Wong, Chao-Jen; Yao, Zizhen et al. (2018) Small noncoding RNAs in FSHD2 muscle cells reveal both DUX4- and SMCHD1-specific signatures. Hum Mol Genet :
Lemmers, Richard Jlf; van der Vliet, Patrick J; Balog, Judit et al. (2018) Deep characterization of a common D4Z4 variant identifies biallelic DUX4 expression as a modifier for disease penetrance in FSHD2. Eur J Hum Genet 26:94-106
Balog, Judit; Goossens, Remko; Lemmers, Richard J L F et al. (2018) Monosomy 18p is a risk factor for facioscapulohumeral dystrophy. J Med Genet 55:469-478
Campbell, Amy E; Shadle, Sean C; Jagannathan, Sujatha et al. (2018) NuRD and CAF-1-mediated silencing of the D4Z4 array is modulated by DUX4-induced MBD3L proteins. Elife 7:
de Greef, Jessica C; Krom, Yvonne D; den Hamer, Bianca et al. (2018) Smchd1 haploinsufficiency exacerbates the phenotype of a transgenic FSHD1 mouse model. Hum Mol Genet 27:716-731
Campbell, Amy E; Belleville, Andrea E; Resnick, Rebecca et al. (2018) Facioscapulohumeral dystrophy: activating an early embryonic transcriptional program in human skeletal muscle. Hum Mol Genet 27:R153-R162
Mul, Karlien; Heatwole, Chad; Eichinger, Katy et al. (2018) Electrical impedance myography in facioscapulohumeral muscular dystrophy: A 1-year follow-up study. Muscle Nerve 58:213-218
Hendrickson, Peter G; DorĂ¡is, Jessie A; Grow, Edward J et al. (2017) Conserved roles of mouse DUX and human DUX4 in activating cleavage-stage genes and MERVL/HERVL retrotransposons. Nat Genet 49:925-934
Campbell, Amy E; Oliva, Jonathan; Yates, Matthew P et al. (2017) BET bromodomain inhibitors and agonists of the beta-2 adrenergic receptor identified in screens for compounds that inhibit DUX4 expression in FSHD muscle cells. Skelet Muscle 7:16

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