This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. Primary support for the subproject and the subproject's principal investigator may have been provided by other sources, including other NIH sources. The Total Cost listed for the subproject likely represents the estimated amount of Center infrastructure utilized by the subproject, not direct funding provided by the NCRR grant to the subproject or subproject staff. The objective of the Sequencing and Informatics core at the National Center for Genome Resources (NCGR) is to provide next-generation sequencing and bioinformatics services, education and support for the NM-INBRE researchers and students. Importantly, this core will create preliminary data for researchers for discoveries and competitiveness on future grants and publications with the following specific aims:
Aim 1 Resource Services and Development. Provide sequencing and bioinformatics analysis support and services to the NM-INBRE network while continuing to improve sequencing and bioinformatics analysis techniques to represent, interpret, and evaluate testable hypotheses in the thematic areas of the New Mexico INBRE consortium.
Aim 2 Education. There is great importance and novelty in training students in this rapidly developing field. This emerging technology sets the stage for scientists and health professionals to be ready for delivering new prognostic and diagnostic techniques and address personalized medicine. Our education plan is to develop a K-12 pilot education program, promote and present seminars, workshops, outreach, credit-based courses, consulting, and internship programs for faculty and K-grey students in the areas of next-generation sequencing and bioinformatics.
Aim 3 Collaboration. The core offers unique and sought after technologies that will help foster collaboration within the NM-INBRE network, the Clinical Translational Science Center in New Mexico, and with other state, regional, and national IDeA programs.
This aim will help solidify and forge these relationships to create more leveraged and synergistic research.
Aim 4 Communication. Develop and maintain mechanisms of communicating INBRE opportunities and activities to all participants and to the general public through website and other means.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Exploratory Grants (P20)
Project #
5P20RR016480-11
Application #
8359754
Study Section
Special Emphasis Panel (ZRR1-RI-4 (01))
Project Start
2011-03-01
Project End
2012-02-29
Budget Start
2011-03-01
Budget End
2012-02-29
Support Year
11
Fiscal Year
2011
Total Cost
$615,390
Indirect Cost
Name
New Mexico State University Las Cruces
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
173851965
City
Las Cruces
State
NM
Country
United States
Zip Code
88003
Licon-Munoz, Yamhilette; Fordyce, Colleen A; Hayek, Summer Raines et al. (2018) V-ATPase-dependent repression of androgen receptor in prostate cancer cells. Oncotarget 9:28921-28934
Duplessis, Christopher; Gregory, Michael; Frey, Kenneth et al. (2018) Evaluating the discriminating capacity of cell death (apoptotic) biomarkers in sepsis. J Intensive Care 6:72
Johnston, Robert K; Harper, Jason C; Tartis, Michaelann S (2017) Control over Silica Particle Growth and Particle-Biomolecule Interactions Facilitates Silica Encapsulation of Mammalian Cells with Thickness Control. ACS Biomater Sci Eng 3:2098-2109
Rossi, Shannan L; Tesh, Robert B; Azar, Sasha R et al. (2016) Characterization of a Novel Murine Model to Study Zika Virus. Am J Trop Med Hyg 94:1362-9
Shuster, Michele; Claussen, Kira; Locke, Melly et al. (2016) BIOINFORMATICS IN THE K-8 CLASSROOM: DESIGNING INNOVATIVE ACTIVITIES FOR TEACHER IMPLEMENTATION. Int J Des Learn 7:60-70
Tsalik, Ephraim L; Henao, Ricardo; Nichols, Marshall et al. (2016) Host gene expression classifiers diagnose acute respiratory illness etiology. Sci Transl Med 8:322ra11
Colip, Leslie; Burge, Mark R; Sandy, Phillip et al. (2016) Exercise Intervention Improves the Metabolic Profile and Body Composition of Southwestern American Indian Adolescents. J Diabetes Obes 3:
Reiss, Rebecca A; Guerra, Peter; Makhnin, Oleg (2016) Metagenome phylogenetic profiling of microbial community evolution in a tetrachloroethene-contaminated aquifer responding to enhanced reductive dechlorination protocols. Stand Genomic Sci 11:88
Camacho, Jenny E; Shah, Vallabh O; Schrader, Ronald et al. (2016) PERFORMANCE OF A1C VERSUS OGTT FOR THE DIAGNOSIS OF PREDIABETES IN A COMMUNITY-BASED SCREENING. Endocr Pract 22:1288-1295
Andrade, C C; Young, K I; Johnson, W L et al. (2016) Rise and fall of vector infectivity during sequential strain displacements by mosquito-borne dengue virus. J Evol Biol 29:2205-2218

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