FACILITIES, EQUIPMENT AND OTHER RESOURCES BIOINFORMATICS AND SYSTEMS BIOLOGY CORE UNIVERSITY OF ILLINOIS Rodriguez Zas is a faculty member in the Department of Animal Sciences and Department of Statistics, as well as an affiliate of the Institute for Genomic Biology (IGB), the Center for Advanced Study, and the UIUC Neuroscience Program. The facilities in these units and the UIUC library (the nation's largest state university library) will be available to the interdisciplinary research described in the proposal. For more information on these facilities please visit http://wvwv.ansci.illinois.edu, www.igb.illinois.edu, and www.stat.illinois.edu. The University of Illinois is home to the National Center for Supercomputing Applications (www.ncsa.illinois.edu/) and Blue Waters supercomputer infrastructure (www.ncsa.illinois.edu/BlueWaters/), which are made available to local researchers. Laboratory and Office: Rodriguez Zas'bioinformatics laboratories are housed in three rooms totaling 600 sq. ft in the Animal Sciences Laboratory at the University of Illinois at Urbana-Champaign. These labs house multiple dry lab resources and computer equipment, and benefit from the extensive infrastructure of the University of Illinois at Urbana- Champaign. A state-of-the-art computer network is maintained across campus and provides distributed data storage, automated backup, library access, and shared software. Desk-space at Dr. Rodriguez Zas'lab is available for the personnel in this project. Rodriguez Zas has an office adjacent to the labs

Agency
National Institute of Health (NIH)
Institute
National Institute on Drug Abuse (NIDA)
Type
Center Core Grants (P30)
Project #
2P30DA018310-11
Application #
8871877
Study Section
Special Emphasis Panel (ZDA1-EXL-T (02))
Project Start
Project End
Budget Start
2014-06-01
Budget End
2015-05-31
Support Year
11
Fiscal Year
2014
Total Cost
$246,932
Indirect Cost
$64,087
Name
University of Illinois Urbana-Champaign
Department
Type
DUNS #
041544081
City
Champaign
State
IL
Country
United States
Zip Code
61820
Skinner, Owen S; Catherman, Adam D; Early, Bryan P et al. (2014) Fragmentation of integral membrane proteins in the gas phase. Anal Chem 86:4627-34
Southey, Bruce R; Lee, Ji Eun; Zamdborg, Leonid et al. (2014) Comparing label-free quantitative peptidomics approaches to characterize diurnal variation of peptides in the rat suprachiasmatic nucleus. Anal Chem 86:443-52
Liu, Jing-Xin; Aerts, Jordan T; Rubakhin, Stanislav S et al. (2014) Analysis of endogenous nucleotides by single cell capillary electrophoresis-mass spectrometry. Analyst 139:5835-42
LeDuc, Richard D; Fellers, Ryan T; Early, Bryan P et al. (2014) The C-score: a Bayesian framework to sharply improve proteoform scoring in high-throughput top down proteomics. J Proteome Res 13:3231-40
Akhtar, Malik N; Southey, Bruce R; Andrén, Per E et al. (2014) Identification of best indicators of peptide-spectrum match using a permutation resampling approach. J Bioinform Comput Biol 12:1440001
Moroz, Leonid L; Kocot, Kevin M; Citarella, Mathew R et al. (2014) The ctenophore genome and the evolutionary origins of neural systems. Nature 510:109-14
Akhtar, Malik N; Southey, Bruce R; Andrén, Per E et al. (2014) Accurate assignment of significance to neuropeptide identifications using Monte Carlo k-permuted decoy databases. PLoS One 9:e111112
Cannon, Joe R; Cammarata, Michael B; Robotham, Scott A et al. (2014) Ultraviolet photodissociation for characterization of whole proteins on a chromatographic time scale. Anal Chem 86:2185-92
Ota, Nobutoshi; Rubakhin, Stanislav S; Sweedler, Jonathan V (2014) D-Alanine in the islets of Langerhans of rat pancreas. Biochem Biophys Res Commun 447:328-33
Li, Yihan; Compton, Philip D; Tran, John C et al. (2014) Optimizing capillary electrophoresis for top-down proteomics of 30-80 kDa proteins. Proteomics 14:1158-64

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