Core D: Genetic Modification Core. Diabetes research is commonly conducted by comparing various functions in model organisms, including mice, following the introduction of specific alterations into the genome. The DRC Genetic Modification Core leverages a number of institutional facilities to provide a cost-effective, shared resource for the facile genetic modification of cells and animals needed for DRC investigators to complete studies relevant to type 1 and type 2 diabetes. Purpose: The Genetic Modification Core offers services that enable DRC researchers to: 1. generate complex targeting vectors for conventional knock-ins/knock-outs, genome-editing tools such as TALEN and CRISPR/Cas9, and standard lentiviral-mediated gene transfers. 2. modify ES or other cells with such vectors. 3. characterize and expand genetically modified cell lines. 4. deliver modified ES cells to blastocysts and generate modified mice lines. 5. inject fertilized eggs with TALEN and CRISPR/Cas9 for direct in vivo genome editing. 5. use transgenic methods to create genetically modified mice. 6. assist investigators with the optimal storage of, recovery of, and transfer of modified mouse lines. Benefits to DRC Community: The Genetic Modification Core enables access of DRC researchers to technologies and expertise that would require years to replicate within individual laboratories. In the past 2 years, the facilities that comprise the DRC Genetic Modification Core assisted 77 investigators from 35 DRC laboratories with an average of 269 procedures annually. 61 different currently active projects totaling $15,903,865 annual direct costs ($10,694,539 from NIH sources) have benefited through these efforts. The DRC Genetic Modification Core coordinates multiple UCSF facilities that provide these technically challenging services to DRC researchers. The DRC Core lowers barriers to enable the use of these necessary capabilities by DRC researchers. The DRC Core also provides feedback and resources to the component facilities so that they evolve to meet the emerging genetic modification needs of DRC researchers. Technology Development: All DRC Cores interact with DRC members to define service needs to be developed by Core Staff. The DRC Executive Committee selects proposals that meet emerging needs by DRC members. Within the past funding period, DRC support has developed the Core's ability to generate both knock-ins and transgenics in non-obese diabetes (NOD) mouse background, lentivirus-based methods for transgenesis, and TALEN and CRISPR/Cas9-directed modifications in a variety of model organisms including mice, flies and worms. This support for the development of new technologies within the Core thus ensures that DRC investigators have cost-effective access to the most up-to-date genetic modification tools they require.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Center Core Grants (P30)
Project #
2P30DK063720-11
Application #
8874798
Study Section
Special Emphasis Panel (ZDK1-GRB-S (J4))
Project Start
Project End
Budget Start
2015-04-01
Budget End
2016-03-31
Support Year
11
Fiscal Year
2015
Total Cost
$149,055
Indirect Cost
$54,940
Name
University of California San Francisco
Department
Type
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94143
Roth, Theodore L; Puig-Saus, Cristina; Yu, Ruby et al. (2018) Reprogramming human T cell function and specificity with non-viral genome targeting. Nature 559:405-409
Hirano, Arisa; Hsu, Pei-Ken; Zhang, Luoying et al. (2018) DEC2 modulates orexin expression and regulates sleep. Proc Natl Acad Sci U S A 115:3434-3439
Tan, Yu-Ting; Ye, Lin; Xie, Fei et al. (2018) Respecifying human iPSC-derived blood cells into highly engraftable hematopoietic stem and progenitor cells with a single factor. Proc Natl Acad Sci U S A 115:2180-2185
Young, Arabella; Quandt, Zoe; Bluestone, Jeffrey A (2018) The Balancing Act between Cancer Immunity and Autoimmunity in Response to Immunotherapy. Cancer Immunol Res 6:1445-1452
Paulo, Esther; Wu, Dongmei; Hecker, Peter A et al. (2018) Adipocyte HDAC4 activation leads to beige adipocyte expansion and reduced adiposity. J Endocrinol :
Mongraw-Chaffin, Morgana; Gujral, Unjali P; Kanaya, Alka M et al. (2018) Relation of Ectopic Fat with Atherosclerotic Cardiovascular Disease Risk Score in South Asians Living in the United States (from the Mediators of Atherosclerosis in South Asians Living in America [MASALA] Study). Am J Cardiol 121:315-321
Baeyens, Luc; Lemper, Marie; Staels, Willem et al. (2018) (Re)generating Human Beta Cells: Status, Pitfalls, and Perspectives. Physiol Rev 98:1143-1167
Lo, Wan-Lin; Shah, Neel H; Ahsan, Nagib et al. (2018) Lck promotes Zap70-dependent LAT phosphorylation by bridging Zap70 to LAT. Nat Immunol 19:733-741
Paulo, Esther; Wu, Dongmei; Wang, Yangmeng et al. (2018) Sympathetic inputs regulate adaptive thermogenesis in brown adipose tissue through cAMP-Salt inducible kinase axis. Sci Rep 8:11001
Miller, Corey N; Proekt, Irina; von Moltke, Jakob et al. (2018) Thymic tuft cells promote an IL-4-enriched medulla and shape thymocyte development. Nature 559:627-631

Showing the most recent 10 out of 531 publications