The Genomics Resources Core provides the biomedical research community a turnkey solution for the problems in the generation and analysis of genomic data. Following a massive expansion in 2009, the Core now offers services in Sanger sequencing, next generation 454 pyrosequencing, NimbleGen microarrays, single nucleotide polymorphism analysis for genotyping, high throughput sample preparation, and bioinformatic data analysis. The Core has successfully implemented the Interdisciplinary Triangle of Collaboration, an innovative operational plan to offer specialized technical expertise in both data generation and data analysis. Core personnel become part of the research team, filling knowledge gaps in molecular methods and bioinformatics, and ensuring a holistic approach to research projects, from project planning and consultation, to sample submission, data generation, data analysis and bioinformatics, culminating with publication and reporting assistance. Strategic partnerships with other institutions extend the Core's offering beyond our equipment capabilities. The Core provides education and outreach to assist investigators in staying abreast of current technologies and analytical methods. In sum, our strategy is to create a path for biomedical investigators to exploit advanced genomics technology and the bioinformatics expertise needed for analysis of data, and by doing so allow them to take their research in new directions. By helping investigators succeed, we advance biomedical research and increase the competitiveness of University of Idaho investigators for extramural funding, while becoming financially self-sustaining as a result of fee-for service revenues. We expect nearly all personnel and service contract costs to be recovered through user fees by the end of COBRE support as additional services are added and our user base expands.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Center Core Grants (P30)
Project #
5P30GM103324-02
Application #
8643801
Study Section
Special Emphasis Panel (ZRR1-RI-B)
Project Start
Project End
Budget Start
2014-02-01
Budget End
2015-01-31
Support Year
2
Fiscal Year
2014
Total Cost
$348,684
Indirect Cost
$80,650
Name
University of Idaho
Department
Type
DUNS #
075746271
City
Moscow
State
ID
Country
United States
Zip Code
83844
Trumbo, Daryl R; Epstein, Brendan; Hohenlohe, Paul A et al. (2016) Mixed population genomics support for the central marginal hypothesis across the invasive range of the cane toad (Rhinella marina) in Australia. Mol Ecol 25:4161-76
Funk, W Chris; Lovich, Robert E; Hohenlohe, Paul A et al. (2016) Adaptive divergence despite strong genetic drift: genomic analysis of the evolutionary mechanisms causing genetic differentiation in the island fox (Urocyon littoralis). Mol Ecol 25:2176-94
Magalhaes, Isabel S; D'Agostino, Daniele; Hohenlohe, Paul A et al. (2016) The ecology of an adaptive radiation of three-spined stickleback from North Uist, Scotland. Mol Ecol 25:4319-36
Fernandes, K A; Bloomsburg, S J; Miller, C J et al. (2016) Novel axon projection after stress and degeneration in the Dscam mutant retina. Mol Cell Neurosci 71:1-12
Kim, M-S; Hohenlohe, P A; Kim, K-H et al. (2016) Genetic diversity and population structure of Raffaelea quercus-mongolicae, a fungus associated with oak mortality in South Korea. Forest pathology 46:164-167
Simmons, Aaron B; Bloomsburg, Samuel J; Billingslea, Samuel A et al. (2016) Pou4f2 knock-in Cre mouse: A multifaceted genetic tool for vision researchers. Mol Vis 22:705-17
Simmons, Aaron B; Merrill, Morgan M; Reed, Justin C et al. (2016) Defective Angiogenesis and Intraretinal Bleeding in Mouse Models With Disrupted Inner Retinal Lamination. Invest Ophthalmol Vis Sci 57:1563-77
Shen, Jian; Song, Ning; Williams, Christopher J et al. (2016) Effects of low dose estrogen therapy on the vaginal microbiomes of women with atrophic vaginitis. Sci Rep 6:24380
Shi, Xun; Tarazona, Pablo; Brock, Trisha J et al. (2016) A Caenorhabditis elegans model for ether lipid biosynthesis and function. J Lipid Res 57:265-75
Epstein, Brendan; Jones, Menna; Hamede, Rodrigo et al. (2016) Rapid evolutionary response to a transmissible cancer in Tasmanian devils. Nat Commun 7:12684

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