This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. Primary support for the subproject and the subproject's principal investigator may have been provided by other sources, including other NIH sources. The Total Cost listed for the subproject likely represents the estimated amount of Center infrastructure utilized by the subproject, not direct funding provided by the NCRR grant to the subproject or subproject staff. Conventional tomographic approaches for optical imaging are best suited for data sets that contain measurements from a large number of source-detector pairs but few wavelengths (i.e., spatially 'rich,'but spectrally 'sparse'). Due to technical complexities, quantitative broadband spectroscopic technologies are difficult to implement in traditional imaging configurations. As a result, these conventional tomography approaches are not easily implemented with broadband spectroscopy techniques that use only a limited number of source-detector pairs. Our effort in 'sparse tomography,'pr 'parametric reconstruction,'is geared towards data sets that are spectrally 'rich'but spatially 'sparse.' There is evidence that a relatively simple tomographic approach may be a good compromise between the demand for handheld-acquired broadband spectra and the need for depth-sectioned imaging in cancer applications. Based on our analysis of breast clinical data with a forward finite element modeling procedure, we believe the spatial extent of a breast lesion's optical properties is much larger than the structural confines of the tumor as measured by conventional radiological methods (Figure XXX). The top-left panel represents the traditional view of a tumor: a perturbation in optical properties neatly segmented between background (subscript 'bkg') and heterogeneity (subscript 'het'). In a typical Diffuse Optical Spectroscopy measurement, the source (S) and detector (D) are scanned in tandem across a tissue. The results of an actual Diffuse Optical spectroscopy measurement are provided (circles) in comparison with a forward model simulation using a radiative transport model of the SDA provided by the Finite Element Method (squares). We discovered that there was no physical set of simulated optical properties that could replicate the clinical measurement. On the right side of Figure XXX, we present a different view of the tumor: a gradient in optical properties. By varying the properties of the optical property distribution, the clinical and simulated data share a much closer agreement (bottom-right). In a pilot study of 10 patients, we further found that the best agreement between the modeling results and the clinical data is achieved when the spatial extent of the optical property distribution is much larger than radiological size estimates. This is especially true for malignant lesions. The larger spatial extent of the lesion relaxes the number of source-detector pairs necessary to visualize the target. Moreover, by constraining the spatial distribution of optical properties to those given by a Gaussian (or other) distribution also reduces the number of reconstructed variables. Simple reconstructions using such an approach, which we refer to as """"""""sparse tomography,"""""""" also eliminates the need for regularization parameters. Our proposed sparse tomography procedure can be used with any imaging data, although it may work best with systems that have limited imaging capabilities. We will first use our DOS/I instrument to take scans of breast lesions. The data will be processed within the VTS to recover the optical properties that provide a least squares fits to semi-infinite homogenous diffusion models. Next we invoke a Finite Element Model diffusion-based model of a breast lesion with a Gaussian spatial distribution of a perturbation in optical absorption and scattering properties relative to the background optical properties. Simulated data will then be generated with this model using finite element methods. Next the simulated data will be processed with the same least-squares fit to the same semi-infinite homogenous diffusion model. Finally, we will compare our clinical observation with our simulated result, in a chi-squared sense. This process will be iterated until the chi-squared is minimized. We realize that this procedure is in effect """"""""blurring"""""""" the location of the target. However we do not believe that this description of a tumor is unphysical because it is well known that the margins of tumors can be quite extensive compared to the radiologically-determined size.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR001192-32
Application #
8362664
Study Section
Special Emphasis Panel (ZRG1-SBIB-L (40))
Project Start
2011-04-01
Project End
2012-03-31
Budget Start
2011-04-01
Budget End
2012-03-31
Support Year
32
Fiscal Year
2011
Total Cost
$29,563
Indirect Cost
Name
University of California Irvine
Department
Physiology
Type
Schools of Medicine
DUNS #
046705849
City
Irvine
State
CA
Country
United States
Zip Code
92697
Paugh, Jerry R; Alfonso-Garcia, Alba; Nguyen, Andrew Loc et al. (2018) Characterization of expressed human meibum using hyperspectral stimulated Raman scattering microscopy. Ocul Surf :
Verdel, Nina; Lentsch, Griffin; Balu, Mihaela et al. (2018) Noninvasive assessment of skin structure by combined photothermal radiometry and optical spectroscopy: coregistration with multiphoton microscopy. Appl Opt 57:D117-D122
Friedman, Jacob E; Dobrinskikh, Evgenia; Alfonso-Garcia, Alba et al. (2018) Pyrroloquinoline quinone prevents developmental programming of microbial dysbiosis and macrophage polarization to attenuate liver fibrosis in offspring of obese mice. Hepatol Commun 2:313-328
Kennedy, Gordon T; Lentsch, Griffin R; Trieu, Brandon et al. (2017) Solid tissue simulating phantoms having absorption at 970 nm for diffuse optics. J Biomed Opt 22:76013
Takesh, Thair; Sargsyan, Anik; Lee, Matthew et al. (2017) Evaluating the Whitening and Microstructural Effects of a Novel Whitening Strip on Porcelain and Composite Dental Materials. Dentistry (Sunnyvale) 7:
Jonscher, Karen R; Stewart, Michael S; Alfonso-Garcia, Alba et al. (2017) Early PQQ supplementation has persistent long-term protective effects on developmental programming of hepatic lipotoxicity and inflammation in obese mice. FASEB J 31:1434-1448
Alfonso-García, Alba; Paugh, Jerry; Farid, Marjan et al. (2017) A machine learning framework to analyze hyperspectral stimulated Raman scattering microscopy images of expressed human meibum. J Raman Spectrosc 48:803-812
Takesh, Thair; Sargsyan, Anik; Anbarani, Afarin et al. (2017) Effects of a Novel Whitening Formulation on Dental Enamel. Dentistry (Sunnyvale) 7:
Choi, Bernard; Tan, Wenbin; Jia, Wangcun et al. (2016) The Role of Laser Speckle Imaging in Port-Wine Stain Research: Recent Advances and Opportunities. IEEE J Sel Top Quantum Electron 2016:
Wang, Mingqiu; Ravindranath, Shreyas R; Rahim, Maha K et al. (2016) Evolution of Multivalent Nanoparticle Adhesion via Specific Molecular Interactions. Langmuir 32:13124-13136

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