This subproject is one of many research subprojects utilizing the resources provided by a Center grant funded by NIH/NCRR. Primary support for the subproject and the subproject's principal investigator may have been provided by other sources, including other NIH sources. The Total Cost listed for the subproject likely represents the estimated amount of Center infrastructure utilized by the subproject, not direct funding provided by the NCRR grant to the subproject or subproject staff. Legionella pneumophila is a facultative gram negative bacterium that can infect humans and cause a severe pneumonia known as Legionnaires disease. The bacteria are phagocytozed by macrophages and translocate effector proteins through a Type IV secretion system into the host cytoplasm. These effector proteins facilitate the survival and replication of the bacteria in a vacuole like compartment through several different mechanisms. VipF (Vacuolar protein sorting Inhibitor Protein F) was identified by a pathogen effector screen to identify Legionella effector proteins that are able to alter host cell protein trafficking pathways. Analysis of the VipF primary sequence reveals two GCN5-related acetyltransferase (GNAT) domains. Homology modeling along with small-angle X-ray scattering (SAXS), performed at CHESS, suggest that VipF is a bilobal monomeric protein. GNATs are a very diverse superfamily of proteins that are responsible for catalyzing the transfer of an acetyl group from acetyl-CoA to a primary amine of an acceptor peptide or small molecule. There are many reports of protein acetylation in diverse biological processes but little is known about what enzymes are responsible for each modification event and what its role is in regulating membrane trafficking. This research proposal aims to study the enzymatic activity of VipF and the mechanism by which it may alter host trafficking factors through a combination of genetics and cell biology coupled with biochemistry and structural biology. The major goals are to determine the molecular structure of VipF, elucidate its enzymatic mechanism and acetylated target, and understand how the enzymatic activity alters the vacuole protein sorting pathway in yeast. This work is of fundamental importance to understand how the bacterial effector protein VipF is able aid Legionella to form a permissive vacuole that undergo normal phagolysosome maturation.

Agency
National Institute of Health (NIH)
Institute
National Center for Research Resources (NCRR)
Type
Biotechnology Resource Grants (P41)
Project #
5P41RR001646-29
Application #
8363532
Study Section
Special Emphasis Panel (ZRG1-BCMB-E (40))
Project Start
2011-07-01
Project End
2012-06-30
Budget Start
2011-07-01
Budget End
2012-06-30
Support Year
29
Fiscal Year
2011
Total Cost
$25,164
Indirect Cost
Name
Cornell University
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
872612445
City
Ithaca
State
NY
Country
United States
Zip Code
14850
Kozlov, Guennadi; Wong, Kathy; Gehring, Kalle (2018) Crystal structure of the Legionella effector Lem22. Proteins 86:263-267
Ménade, Marie; Kozlov, Guennadi; Trempe, Jean-François et al. (2018) Structures of ubiquitin-like (Ubl) and Hsp90-like domains of sacsin provide insight into pathological mutations. J Biol Chem 293:12832-12842
Xu, Jie; Kozlov, Guennadi; McPherson, Peter S et al. (2018) A PH-like domain of the Rab12 guanine nucleotide exchange factor DENND3 binds actin and is required for autophagy. J Biol Chem 293:4566-4574
Dean, Dexter N; Rana, Pratip; Campbell, Ryan P et al. (2018) Propagation of an A? Dodecamer Strain Involves a Three-Step Mechanism and a Key Intermediate. Biophys J 114:539-549
Chen, Yu Seby; Kozlov, Guennadi; Fakih, Rayan et al. (2018) The cyclic nucleotide-binding homology domain of the integral membrane protein CNNM mediates dimerization and is required for Mg2+ efflux activity. J Biol Chem 293:19998-20007
Xu, Caishuang; Kozlov, Guennadi; Wong, Kathy et al. (2016) Crystal Structure of the Salmonella Typhimurium Effector GtgE. PLoS One 11:e0166643
Cogliati, Massimo; Zani, Alberto; Rickerts, Volker et al. (2016) Multilocus sequence typing analysis reveals that Cryptococcus neoformans var. neoformans is a recombinant population. Fungal Genet Biol 87:22-9
Oot, Rebecca A; Kane, Patricia M; Berry, Edward A et al. (2016) Crystal structure of yeast V1-ATPase in the autoinhibited state. EMBO J 35:1694-706
Lucido, Michael J; Orlando, Benjamin J; Vecchio, Alex J et al. (2016) Crystal Structure of Aspirin-Acetylated Human Cyclooxygenase-2: Insight into the Formation of Products with Reversed Stereochemistry. Biochemistry 55:1226-38
Bauman, Joseph D; Harrison, Jerry Joe E K; Arnold, Eddy (2016) Rapid experimental SAD phasing and hot-spot identification with halogenated fragments. IUCrJ 3:51-60

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