The specific problems in behaviors and cognition that are caused by major neurological diseases including Alzheimer's, Parkinson's, Huntington's, and ALS arise due to the progressive degeneration and dysfunction of neurons in selected regions throughout the brain. Similar causes are also hypothesized for the common decline in behaviors and cognition associated with natural aging. Yet, the entire complement of neurons that become progressively dysmorphic and dysfunctional through natural aging remains unknown. A paradigm shifting approach for discovering drugs that prevent neurodegeneration through natural aging and disease models would be to study the effect of each chemical compound in the entire nervous system of a well-defined model organism in a high-throughput manner. We propose to develop a novel high-throughput screening platform using optics and microfluidics (opto-fluidics) that will enable characterization of each neuron in the whole nervous system within milliseconds with sub-cellular resolution in the genetic model Caenorhabditis elegans. The marriage of an ultra-rapid screening method with novel in vivo models will open the possibility for unbiased screens that do not require any prior knowledge of potential drug targets and pathways. We have chosen C. elegans because it is the only animal with a completely characterized nervous system, is amenable to high-throughput drug screening with microfluidics, and is a validated model for aging and neurological diseases in humans. The proposed opto-fluidics platform will be able to rapidly quantify the morphological integrity of every neuron in an animal's nervous system in milliseconds as they pass through a microfludic channel. Individual neurons can easily be identified by combinatorial expression of diverse fluorescent reporters in a single animal. Besides high-speed quantification capabilities, the ability to automatically interface with 96- or 384-well plates will enable for loading of a large number of populations of worms each treated with a different chemical compound into the opto-fluidics chip. The principles uncovered from these studies will have a profound impact on understanding the neuronal basis for how behavioral performance declines in disease and aging, and how to prevent this decline in humans.

Agency
National Institute of Health (NIH)
Institute
National Institute on Aging (NIA)
Type
Research Project (R01)
Project #
5R01AG041135-05
Application #
8856453
Study Section
Special Emphasis Panel (ZRG1)
Program Officer
Wise, Bradley C
Project Start
2011-09-30
Project End
2016-12-31
Budget Start
2015-07-01
Budget End
2016-12-31
Support Year
5
Fiscal Year
2015
Total Cost
Indirect Cost
Name
University of Texas Austin
Department
Engineering (All Types)
Type
Biomed Engr/Col Engr/Engr Sta
DUNS #
170230239
City
Austin
State
TX
Country
United States
Zip Code
78712
Mondal, Sudip; Hegarty, Evan; Sahn, James J et al. (2018) High-Content Microfluidic Screening Platform Used To Identify ?2R/Tmem97 Binding Ligands that Reduce Age-Dependent Neurodegeneration in C. elegans SC_APP Model. ACS Chem Neurosci 9:1014-1026
Nordquist, Sarah K; Smith, Sofia R; Pierce, Jonathan T (2018) Systematic Functional Characterization of Human 21st Chromosome Orthologs in Caenorhabditis elegans. G3 (Bethesda) 8:967-979
Martin, Chris; Li, Tianqi; Hegarty, Evan et al. (2018) Line excitation array detection fluorescence microscopy at 0.8 million frames per second. Nat Commun 9:4499
Yi, Bitna; Sahn, James J; Ardestani, Pooneh Memar et al. (2017) Small molecule modulator of sigma 2 receptor is neuroprotective and reduces cognitive deficits and neuroinflammation in experimental models of Alzheimer's disease. J Neurochem 140:561-575
Mondal, Sudip; Hegarty, Evan; Martin, Chris et al. (2016) Large-scale microfluidics providing high-resolution and high-throughput screening of Caenorhabditis elegans poly-glutamine aggregation model. Nat Commun 7:13023
Vidal-Gadea, Andrés; Ward, Kristi; Beron, Celia et al. (2015) Magnetosensitive neurons mediate geomagnetic orientation in Caenorhabditis elegans. Elife 4:
Gokce, Sertan Kutal; Guo, Samuel X; Ghorashian, Navid et al. (2014) A fully automated microfluidic femtosecond laser axotomy platform for nerve regeneration studies in C. elegans. PLoS One 9:e113917
Ghorashian, Navid; Gökçe, Sertan Kutal; Guo, Sam Xun et al. (2013) An automated microfluidic multiplexer for fast delivery of C. elegans populations from multiwells. PLoS One 8:e74480
Zlotkowski, Katherine; Pierce-Shimomura, Jon; Siegel, Dionicio (2013) Small-molecule-mediated axonal branching in Caenorhabditis elegans. Chembiochem 14:307-10
Iyer, Sangeetha; Pierce-Shimomura, Jonathan T (2013) Worming our way to Alzheimer's disease drug discovery. Biol Psychiatry 73:396-8

Showing the most recent 10 out of 13 publications