Arenaviruses such as Lassa fever virus (LASV) are known to cause deadly hemorrhagic fever diseases in human with little preventive or prophylactic measures. A hallmark of arenavirus-induced hemorrhagic fevers is the general immune suppression in severe and lethally infected patients. The current lack of knowledge on how arenaviral infections lead to host immune suppression is a major barrier to understanding the virulence nature and disease pathogenesis of these human pathogens and has hindered the development of effective vaccine and therapeutic intervention. Arenavirus nucleoprotein (NP) has been shown to suppress the interferon (IFN) induction, the mechanism of which, however, remains elusive. We have recently reported the first crystal structure of the LASV NP protein (Qi, et al, Dec 2010, Nature). An unexpected finding from our structural and functional analyses is that the C domain of NP folds into a functional 3'-5'exoribonuclease (RNase) that degrades various types of RNA substrates and is essential for the NP's ability to suppress the IFN induction. As IFNs are induced by the cellular pattern recognition receptors (PRRs) that recognize viral pathogen-associated molecular patterns (PAMP) RNAs, we hypothesize that arenaviral NP proteins evade host innate immunity by specifically degrading these PAMP RNA ligands via its exoribonuclease activity. LASV NP is the first virally encoded RNase that uses exoribonuclease activity to block the IFN induction, which represents a novel mechanism of viral immune evasion. The goal of this proposal therefore is to provide mechanistic insights into this novel approach of viral immune evasion by arenavirus NP exoribonuclease activity. Specifically, we will define the structural basis of LASV NP in mediating IFN suppression and exoribonuclease activities (Aim #1) and determine its RNA substrate specificity (Aim #2). Finally, we will complement and extend biochemical and cell-based studies outlined in Aims #1 and #2 to determine the role of NP RNase in mediating host immune suppression and pathogenesis using a disease-relevant small animal model (Aim #3). The novelties of the study are defined not only by the unique concept of how virally encoded RNase mediates the IFN suppression but also by a combination of unique experimental systems that integrate protein structural biochemistry, molecular and cellular biology, infectious virus, and a pertinent animal model for understanding human hemorrhagic fever diseases. The proposed study is highly significant as it will reveal for the first time a novel molecular mechanism of immune evasion mediated by arenaviral NP protein that may offer opportunities for development of effective therapeutics and/or vaccines against lethal arenaviral hemorrhagic fever infections in humans. As LASV NP is the first identified viral RNase with IFN suppression function, this study has a broaden significance in understanding the virus-host interactions, in particular, on how viral pathogens employ various ingenious strategies to evade host immunity.

Public Health Relevance

Lassa fever virus infection can lead to severe and sometime lethal hemorrhagic fever (HF) diseases in humans, for which there is no vaccine and effective drugs. We have uncovered a novel functional mechanism of Lassa virus NP protein in mediating immune suppression, in which NP blocks the IFN induction through its novel exoribonuclease function. This is the first virally encoded exoribonuclease involved in innate immune suppression. We propose to mechanistically characterize this novel mechanism of NP in host immune suppression, which are expected to reveal potential targets for the development of effective therapeutics and advance our understanding of virus-host interactions in general.

National Institute of Health (NIH)
National Institute of Allergy and Infectious Diseases (NIAID)
Research Project (R01)
Project #
Application #
Study Section
Virology - B Study Section (VIRB)
Program Officer
Repik, Patricia M
Project Start
Project End
Budget Start
Budget End
Support Year
Fiscal Year
Total Cost
Indirect Cost
University of Minnesota Twin Cities
Veterinary Sciences
Schools of Veterinary Medicine
United States
Zip Code
Ly, Hinh (2017) Differential Immune Responses to New World and Old World Mammalian Arenaviruses. Int J Mol Sci 18:
Dhanwani, Rekha; Ly, Hinh; Liang, Yuying (2017) Recombinant Tri-Segmented Pichinde Virus as a Novel Live Viral Vaccine Platform. Methods Mol Biol 1581:169-179
Meyer, Bjoern; Ly, Hinh (2016) Inhibition of Innate Immune Responses Is Key to Pathogenesis by Arenaviruses. J Virol 90:3810-8
Shao, Junjie; Liu, Xiaoying; Ly, Hinh et al. (2016) Characterization of the Glycoprotein Stable Signal Peptide in Mediating Pichinde Virus Replication and Virulence. J Virol 90:10390-10397
Ly, Hinh; Liang, Yuying (2015) Immune evasion mechanisms of arenaviruses. Oncotarget 6:40386-7
Huang, Qinfeng; Shao, Junjie; Lan, Shuiyun et al. (2015) In vitro and in vivo characterizations of pichinde viral nucleoprotein exoribonuclease functions. J Virol 89:6595-607
Dhanwani, Rekha; Zhou, Yanqin; Huang, Qinfeng et al. (2015) A Novel Live Pichinde Virus-Based Vaccine Vector Induces Enhanced Humoral and Cellular Immunity after a Booster Dose. J Virol 90:2551-60
Xing, Junji; Ly, Hinh; Liang, Yuying (2015) The Z proteins of pathogenic but not nonpathogenic arenaviruses inhibit RIG-I-like receptor-dependent interferon production. J Virol 89:2944-55
Shao, Junjie; Liang, Yuying; Ly, Hinh (2015) Human hemorrhagic Fever causing arenaviruses: molecular mechanisms contributing to virus virulence and disease pathogenesis. Pathogens 4:283-306
Meyer, Bjoern; Ly, Hinh (2015) Immunosuppressive arenaviral exoribonuclease. Oncotarget 6:32315-6

Showing the most recent 10 out of 24 publications