The overarching goal of this proposal is to better understand key steps in the biosynthesis, utilization and recycling of trehalose in mycobacteria. The disaccharide trehalose is important for multiple aspects of mycobacterial physiology and has been shown to be essential for viability as is the downstream utilization pathway that leads to trehalose monomycolate production and export. Recycling of the trehalose used to build the outer membrane is important for M. tuberculosis virulence and is used to elongate a cytosolic glucan. This research project possesses 3 separate aspects that are all related to trehalose metabolism. First, we will identify structural features of M. tuberculosis GlgE that promote substrate binding and catalysis as a basis for understanding its function in synthesizing the mycobacteria glucan. Since inhibition of GlgE promotes rapid killing of M. tuberculosis, mechanism based inhibitors will be synthesized and used in conjunction with steady-state kinetics to better understand the enzyme mechanism. X-ray crystallographic studies will be performed to characterize interactions with GlgE substrates, which will form the basis for drug-development targeting GlgE. The second portion of this study aims to further characterize the mechanism of mycobacterial killing by the anti-tubercular drug ebselen. We have shown that ebselen strongly inhibits Antigen 85C through a covalent modification that disrupts the enzyme active site and inactivates it. Experiments performed in vivo and ex vivo will identify which mycobacterial proteins are modified by ebselen in a bacterial culture.
The third aim will characterize the structure-function relationship of the enzyme catalyzing the final step in the de novo trehalose biosynthetic pathway, trehalose phosphate phosphatase 2. Steady-state kinetics will be used to study the effects of active site mutations and inhibition in vitro. Inactive mutant will also be used in equilibrium binding studies to better understand substrate selectivity. This information will inform studies performed in vivo and determine if TPP2 is a valid drug target. The results from these studies will be used to advance our knowledge of the metabolic pathways that use trehalose. The biosynthesis of the building blocks used to form the mycomembrane, mycolic acids and trehalose monomycolate, are known targets of first and second-line anti-tubercular drugs. Therefore, it is expected that further defining the biosynthetic pathway leading to trehalose monomycolate and characterizing the enzymes that attach mycolic acids to the mycomembrane will offer new insights for anti-tubercular drug development. It is expected that this study will extend the available Mycobacterium tuberculosis drug targets to include enzymes in the trehalose biosynthetic and utilization pathways.

Public Health Relevance

The World Health Organization estimates that 1.4 million people each year die from tuberculosis. The first-line drugs used to treat tuberculosis have been used for 50 years and strains resistant to these drugs are becoming increasingly common. This research aims to characterize the biosynthesis and use of a simple sugar that is vitally important for the viability of M. tuberculosis extend the research community's ability to develop new therapies to treat this infectious disease.

Agency
National Institute of Health (NIH)
Type
Research Project (R01)
Project #
5R01AI105084-02
Application #
8723058
Study Section
Macromolecular Structure and Function E Study Section (MSFE)
Program Officer
Lacourciere, Karen A
Project Start
Project End
Budget Start
Budget End
Support Year
2
Fiscal Year
2014
Total Cost
Indirect Cost
Name
University of Toledo
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
City
Toledo
State
OH
Country
United States
Zip Code
43606
Thanna, Sandeep; Sucheck, Steven J (2016) Targeting the trehalose utilization pathways of Mycobacterium tuberculosis. Medchemcomm 7:69-85
Thanna, Sandeep; Knudson, Susan E; Grzegorzewicz, Anna et al. (2016) Synthesis and evaluation of new 2-aminothiophenes against Mycobacterium tuberculosis. Org Biomol Chem 14:6119-33
Banco, Michael T; Mishra, Vidhi; Ostermann, Andreas et al. (2016) Neutron structures of the Helicobacter pylori 5'-methylthioadenosine nucleosidase highlight proton sharing and protonation states. Proc Natl Acad Sci U S A 113:13756-13761
Grzegorzewicz, Anna E; Eynard, Nathalie; Quémard, Annaïk et al. (2015) Covalent modification of the Mycobacterium tuberculosis FAS-II dehydratase by Isoxyl and Thiacetazone. ACS Infect Dis 1:91-97
Thanna, Sandeep; Lindenberger, Jared J; Gaitonde, Vishwanath V et al. (2015) Synthesis of 2-deoxy-2,2-difluoro-α-maltosyl fluoride and its X-ray structure in complex with Streptomyces coelicolor GlgEI-V279S. Org Biomol Chem 13:7542-50
Clark, Kevin D; Nacham, Omprakash; Yu, Honglian et al. (2015) Extraction of DNA by magnetic ionic liquids: tunable solvents for rapid and selective DNA analysis. Anal Chem 87:1552-9
Lindenberger, Jared J; Veleti, Sri Kumar; Wilson, Brittney N et al. (2015) Crystal structures of Mycobacterium tuberculosis GlgE and complexes with non-covalent inhibitors. Sci Rep 5:12830
Gaitonde, Vishwanath; Lee, Kyunghee; Kirschbaum, Kristin et al. (2014) Bio-Based Bisfuran: Synthesis, Crystal Structure and Low Molecular Weight Amorphous Polyester. Tetrahedron Lett 55:4141-4145
Veleti, Sri Kumar; Lindenberger, Jared J; Thanna, Sandeep et al. (2014) Synthesis of a poly-hydroxypyrolidine-based inhibitor of Mycobacterium tuberculosis GlgE. J Org Chem 79:9444-50
Favrot, Lorenza; Lajiness, Daniel H; Ronning, Donald R (2014) Inactivation of the Mycobacterium tuberculosis antigen 85 complex by covalent, allosteric inhibitors. J Biol Chem 289:25031-40

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