Actin is the most ubiquitous and conserved eukaryotic protein, and plays a central role in motility and the control of cell form. Understanding the structure and function of actin will have an enormous impact in both the study of normal cellular processes, as well as in the study of diseases such as myopathies. While crystal structures exist for monomeric, G-actin, our structural knowledge of filamentous F-actin has come in large part from electron microscopy. Given that the active form of actin is the filament, understanding the structure and dynamics of the filament in terms of the atomic structure of the monomer has great relevance in such areas as cell motility and muscle contraction. This proposal is aimed at understanding the role of different structural states of actin, as well as the role of these states in the interaction of actin with other proteins, such as myosin, dystrophin and nebulin. Previous evidence shows that the state of an actin filament may be determined in part by the protein nucleating the filament, so studies of F-actin nucleated by the smooth muscle protein fesselin are expected to have important biological relevance. Significant advances in understanding the nature of actin filament states will only come from higher resolution reconstructions of F-actin, and a large thrust will be to use cryo-EM in a Field Emission Gun EM to help achieve this goal. These images, combined with a new algorithm for image analysis of helical polymers, should extend the resolution to the point that domain-domain motions and conformational changes from existing crystal structures can be described with high confidence. An important constraint in generating and interpreting such higher-resolution reconstructions will be to use engineered disulfides between adjacent subunits in the filament. Since a growing body of evidence suggests that conformational changes in actin are necessary for actomyosin motility, insight that will be gained from these studies is likely to have a very direct bearing on understanding muscle contraction.

Agency
National Institute of Health (NIH)
Institute
National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS)
Type
Research Project (R01)
Project #
5R01AR042023-14
Application #
7089126
Study Section
Biophysical Chemistry Study Section (BBCB)
Program Officer
Nuckolls, Glen H
Project Start
1993-12-01
Project End
2007-06-30
Budget Start
2006-07-01
Budget End
2007-06-30
Support Year
14
Fiscal Year
2006
Total Cost
$323,368
Indirect Cost
Name
University of Virginia
Department
Anesthesiology
Type
Schools of Medicine
DUNS #
065391526
City
Charlottesville
State
VA
Country
United States
Zip Code
22904
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Shvetsov, Alexander; Galkin, Vitold E; Orlova, Albina et al. (2008) Actin hydrophobic loop 262-274 and filament nucleation and elongation. J Mol Biol 375:793-801
Benchaar, Sabrina A; Xie, Yongming; Phillips, Martin et al. (2007) Mapping the interaction of cofilin with subdomain 2 on actin. Biochemistry 46:225-33
Cherepanova, Olga; Orlova, Albina; Galkin, Vitold E et al. (2006) Xin-repeats and nebulin-like repeats bind to F-actin in a similar manner. J Mol Biol 356:714-23
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Galkin, Vitold E; Orlova, Albina; Koleske, Anthony J et al. (2005) The Arg non-receptor tyrosine kinase modifies F-actin structure. J Mol Biol 346:565-75
Galkin, Vitold E; Orlova, Albina; Lukoyanova, Natalya et al. (2003) The location of ubiquitin in Lethocerus arthrin. J Mol Biol 325:623-8
Galkin, Vitold E; Orlova, Albina; VanLoock, Margaret S et al. (2003) Do the utrophin tandem calponin homology domains bind F-actin in a compact or extended conformation? J Mol Biol 331:967-72
Galkin, Vitold E; Orlova, Albina; VanLoock, Margaret S et al. (2002) The utrophin actin-binding domain binds F-actin in two different modes: implications for the spectrin superfamily of proteins. J Cell Biol 157:243-51

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