Glucocorticoid receptors, upon association with their cognate steroid ligands, bind to specific DNA sites, thereby activating receptor-dependent transcriptional enhancer elements that in turn stimulate initiation from nearby promoters. The long-term objectives of this study are to determine the molecular mechanisms by which steroid receptors regulate gene expression, to define how these mechanisms might be related to other modes of gene control, and to infer pathways by which coordinated networks of regulated genes might arise and evolve. In the present application, recombinant DNA methods will be used to construct an extensive series of mutations in discrete regions of DNA that are bound specifically by pure glucocorticoid receptor in vitro and are active in vivo as receptor-dependent enhancers. Together with intact, cleaved, and mutant receptor proteins, we will define at the nucleotide level the characteristics of specific receptor: DNA interactions, the consequences of those interactions on DNA and chromatin conformation in vivo and in vitro, and the precise relationships of the binding and template structure alterations to the mechanism of transcriptional enhancement. In addition, nonreceptor factors essential for hormonal regulation will be sought and characterized by biochemical, cell biological, and somatic cell genetic procedures. Understanding the mechanisms that modulate gene expression is central to the problems of human disease and developmental defects; steroid hormones, in particular, regulate a broad spectrum of developmental and physiological phenomena, and are widely used pharmacological agents for immunosuppression and cancer chemotherapy. (D)

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA020535-13
Application #
3165328
Study Section
Molecular Biology Study Section (MBY)
Project Start
1976-12-01
Project End
1989-11-30
Budget Start
1988-12-01
Budget End
1989-11-30
Support Year
13
Fiscal Year
1989
Total Cost
Indirect Cost
Name
University of California San Francisco
Department
Type
Schools of Medicine
DUNS #
073133571
City
San Francisco
State
CA
Country
United States
Zip Code
94143
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Pack, Lindsey R; Yamamoto, Keith R; Fujimori, Danica Galoni? (2016) Opposing Chromatin Signals Direct and Regulate the Activity of Lysine Demethylase 4C (KDM4C). J Biol Chem 291:6060-70
Ward, Jordan D (2015) Rapid and precise engineering of the Caenorhabditis elegans genome with lethal mutation co-conversion and inactivation of NHEJ repair. Genetics 199:363-77
Zhang, Liangyu; Ward, Jordan D; Cheng, Ze et al. (2015) The auxin-inducible degradation (AID) system enables versatile conditional protein depletion in C. elegans. Development 142:4374-84
Ratnappan, Ramesh; Amrit, Francis R G; Chen, Shaw-Wen et al. (2014) Germline signals deploy NHR-49 to modulate fatty-acid ?-oxidation and desaturation in somatic tissues of C. elegans. PLoS Genet 10:e1004829
Schiller, Benjamin J; Chodankar, Rajas; Watson, Lisa C et al. (2014) Glucocorticoid receptor binds half sites as a monomer and regulates specific target genes. Genome Biol 15:418
Chodankar, Rajas; Wu, Dai-Ying; Schiller, Benjamin J et al. (2014) Hic-5 is a transcription coregulator that acts before and/or after glucocorticoid receptor genome occupancy in a gene-selective manner. Proc Natl Acad Sci U S A 111:4007-12
Ward, Jordan D; Yamamoto, Keith R; Asahina, Masako (2014) SUMO as a nuclear hormone receptor effector: New insights into combinatorial transcriptional regulation. Worm 3:e29317
Ward, Jordan D; Mullaney, Brendan; Schiller, Benjamin J et al. (2014) Defects in the C. elegans acyl-CoA synthase, acs-3, and nuclear hormone receptor, nhr-25, cause sensitivity to distinct, but overlapping stresses. PLoS One 9:e92552
Watson, Lisa C; Kuchenbecker, Kristopher M; Schiller, Benjamin J et al. (2013) The glucocorticoid receptor dimer interface allosterically transmits sequence-specific DNA signals. Nat Struct Mol Biol 20:876-83

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