Skin cancer is the most prevalent form of cancer today. This can be attributed to the damaging effects of sunlight which causes the production of DNA photoproducts, otherwise known as photolesions. Researchers have been unable to derive conclusive structure activity relationships in light-induced mutagenesis due to the lack of pure well-characterized photolesion containing DNA for study. The object of this proposal is to determine the structure-activity relationships of the cis-syn, trans-syn, (6,4) and the newly discovered Dewar photoproducts of both TpT and TpC sequences. In addition we will examine the structure activity relationships of multiple lesion containing DNA. In order to do this we will construct site-specific photolesion containing dinucleotides, oligonucleotides, template-primers, DNA fragments, polymers and viruses for the determination of: (1) the structure of the further photoproduct of the (6-4) photoproduct formed in DNA. What is the role of this lesion in type III photoreactivation? (2) the photochemical, chemical and structural properties of photolesions. What role do lesions play in DNA-protein crosslinking and lesion hotspot formation. (3) the high resolution X-ray and combined 2-D NMR and molecular modeling structures of lesion containing duplexes. What role does structure play in recognition of lesions? (4) the mutation spectrum, of a lesion which results from polymerase bypass of a lesion or cluster of lesions. What contributes to high mutagenicity? (5) the relationship between the action of repair enzymes on lesion containing duplex DNA fragments and the amount of photolesion- induced DNA bending and other types of distortion. How are lesions detected? Are some lesions refractory to repair? (6) the lethality and mutation spectrum of lesions in vivo. How does this compare to the in vitro results? Hopefully this work will lead to a more complete understanding of the mechanisms of mutagenesis which will then enable us to better protect ourselves from the environmental mutagens and carcinogens to which we are constantly exposed.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA040463-05
Application #
3180465
Study Section
Bio-Organic and Natural Products Chemistry Study Section (BNP)
Project Start
1985-07-01
Project End
1993-04-30
Budget Start
1989-05-01
Budget End
1990-04-30
Support Year
5
Fiscal Year
1989
Total Cost
Indirect Cost
Name
Washington University
Department
Type
Schools of Arts and Sciences
DUNS #
062761671
City
Saint Louis
State
MO
Country
United States
Zip Code
63130
Smith-Carpenter, Jillian E; Taylor, John-Stephen (2018) Photocrosslinking of G-Quadruplex-Forming Sequences found in Human Promoters. Photochem Photobiol :
Lu, Chen; Smith-Carpenter, Jillian E; Taylor, John-Stephen A (2018) Evidence for Reverse Hoogsteen Hairpin Intermediates in the Photocrosslinking of Human Telomeric DNA Sequences. Photochem Photobiol 94:685-697
Wang, Kesai; Taylor, John-Stephen A (2017) Modulation of cyclobutane thymine photodimer formation in T11-tracts in rotationally phased nucleosome core particles and DNA minicircles. Nucleic Acids Res 45:7031-7041
Cannistraro, Vincent J; Pondugula, Santhi; Song, Qian et al. (2015) Rapid deamination of cyclobutane pyrimidine dimer photoproducts at TCG sites in a translationally and rotationally positioned nucleosome in vivo. J Biol Chem 290:26597-609
Taylor, John-Stephen (2015) Design, synthesis, and characterization of nucleosomes containing site-specific DNA damage. DNA Repair (Amst) 36:59-67
Smith, Jillian E; Lu, Chen; Taylor, John-Stephen (2014) Effect of sequence and metal ions on UVB-induced anti cyclobutane pyrimidine dimer formation in human telomeric DNA sequences. Nucleic Acids Res 42:5007-19
Song, Qian; Cannistraro, Vincent J; Taylor, John-Stephen (2014) Synergistic modulation of cyclobutane pyrimidine dimer photoproduct formation and deamination at a TmCG site over a full helical DNA turn in a nucleosome core particle. Nucleic Acids Res 42:13122-33
Taggart, David J; Camerlengo, Terry L; Harrison, Jason K et al. (2013) A high-throughput and quantitative method to assess the mutagenic potential of translesion DNA synthesis. Nucleic Acids Res 41:e96
Song, Qian; Sherrer, Shanen M; Suo, Zucai et al. (2012) Preparation of site-specific T=mCG cis-syn cyclobutane dimer-containing template and its error-free bypass by yeast and human polymerase ?. J Biol Chem 287:8021-8
Song, Qian; Cannistraro, Vincent J; Taylor, John-Stephen (2011) Rotational position of a 5-methylcytosine-containing cyclobutane pyrimidine dimer in a nucleosome greatly affects its deamination rate. J Biol Chem 286:6329-35

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