Calicheamicin gamma1I (1) from Micromonospora echinospora spp. calichensis is the most prominent of the enediyne family and its unprecedented molecular architecture in conjunction with its superb biological activity and therapeutic value brand 1 an excellent target for the study of natural product biosynthesis and self-resistance. While the synthetic achievements toward 1 have been monumental, the total synthesis of 1 is secondary to the isolation of 1 from large fermentations of M. echinospora and thus, methods to produce mass amounts of 1 and potentially useful variants are still desperately needed. Furthermore, the notably unusual architecture of 1 implies the participation of a remarkably novel biosynthetic pathway. Through a multi- disciplinary approach, the fundamental goal of this proposal is to present rational strategies from which to build a foundation of knowledge regarding 1 biosynthesis and self-resistance. Specifically, we will i) clone the gene cluster encoding for 1 biosynthesis and self-resistance in Micromonospora; ii) elucidate the nucleotide sequence of this unparalleled gene cluster; iii) develop a transformation system for Micromonospora echinospora; iv) provide functional assignments for the putative genes involved in aryltetrasaccharide assembly; v) localize the specific 1 self-resistance genes within this cluster; and vi) elucidate the mechanism by which the corresponding encoded 1 self-resistance proteins function. Achieving these aims will not only provide pioneering discoveries in mechanistic enzymology (formation of aglycone diynenes, hydroxylamine glycosides, thioester sugars, and phenolic-rhamnosides as well as unprecedented modes of resistance to exceptionally reactive natural products), but may also provide access to the rational biosynthetic modification of enediyne structure for new drug leads, biosynthetic methods to introduce 1-targeting or tagging ligands, the potential to construct enediyne overproducing strains and possibly even an enediyne combinatorial biosynthesis program. Should the self-resistance mechanism(s) be applicable, these studies may also lead to gene therapy approaches (via introduction of 1 drug resistance genes into bone marrow cells) for increasing tolerable chemotherapeutic dose levels of 1.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA084374-05
Application #
6633592
Study Section
Bio-Organic and Natural Products Chemistry Study Section (BNP)
Program Officer
Fu, Yali
Project Start
2000-05-01
Project End
2004-08-04
Budget Start
2003-06-01
Budget End
2004-08-04
Support Year
5
Fiscal Year
2003
Total Cost
$261,900
Indirect Cost
Name
University of Wisconsin Madison
Department
Type
Schools of Pharmacy
DUNS #
161202122
City
Madison
State
WI
Country
United States
Zip Code
53715
Cao, Hongnan; Tan, Kemin; Wang, Fengbin et al. (2016) Structural dynamics of a methionine ?-lyase for calicheamicin biosynthesis: Rotation of the conserved tyrosine stacking with pyridoxal phosphate. Struct Dyn 3:034702
Elshahawi, Sherif I; Shaaban, Khaled A; Kharel, Madan K et al. (2015) A comprehensive review of glycosylated bacterial natural products. Chem Soc Rev 44:7591-697
Singh, Shanteri; Michalska, Karolina; Bigelow, Lance et al. (2015) Structural Characterization of CalS8, a TDP-?-D-Glucose Dehydrogenase Involved in Calicheamicin Aminodideoxypentose Biosynthesis. J Biol Chem 290:26249-58
Singh, Shanteri; Kim, Youngchang; Wang, Fengbin et al. (2015) Structural characterization of AtmS13, a putative sugar aminotransferase involved in indolocarbazole AT2433 aminopentose biosynthesis. Proteins 83:1547-54
Peltier-Pain, Pauline; Singh, Shanteri; Thorson, Jon S (2015) Characterization of Early Enzymes Involved in TDP-Aminodideoxypentose Biosynthesis en Route to Indolocarbazole AT2433. Chembiochem 16:2141-6
Wang, Fengbin; Singh, Shanteri; Xu, Weijun et al. (2015) Structural Basis for the Stereochemical Control of Amine Installation in Nucleotide Sugar Aminotransferases. ACS Chem Biol 10:2048-56
Wang, Fengbin; Singh, Shanteri; Zhang, Jianjun et al. (2014) Understanding molecular recognition of promiscuity of thermophilic methionine adenosyltransferase sMAT from SulfolobusĀ solfataricus. FEBS J 281:4224-39
Singh, Shanteri; Zhang, Jianjun; Huber, Tyler D et al. (2014) Facile chemoenzymatic strategies for the synthesis and utilization of S-adenosyl-(L)-methionine analogues. Angew Chem Int Ed Engl 53:3965-9
Elshahawi, Sherif I; Ramelot, Theresa A; Seetharaman, Jayaraman et al. (2014) Structure-guided functional characterization of enediyne self-sacrifice resistance proteins, CalU16 and CalU19. ACS Chem Biol 9:2347-58
Singh, Shanteri; Peltier-Pain, Pauline; Tonelli, Marco et al. (2014) A general NMR-based strategy for the in situ characterization of sugar-nucleotide-dependent biosynthetic pathways. Org Lett 16:3220-3

Showing the most recent 10 out of 59 publications