The Anaplastic Lymphoma Kinase (ALK) is a potent driver oncogene for a relevant subset of cancers, including Anaplastic Large Cell Lymphoma (ALCL), Non Small Cell Lung Cancer (NSCLC), Inflammatory Myofibroblastic tumors (IMT) and neuroblastoma. The recent development and FDA approval of first and second-generation ALK tyrosine kinase inhibitors (TKI) has revolutionized the therapeutic opportunities to treat ALK-driven cancers. In NSCLC TKI inhibitor have dramatic clinical efficacy on such tumors, but the effect is lost after a window of time of 8-10 months because of the development of TKI resistance by the tumor cells. Several molecular mechanisms of resistance have been elucidated or proposed for TKI resistant NSCLC, including ALK mutation, amplifications, or by-pass signaling by other tyrosine kinases. The elucidation of the mechanisms of resistance can dictate additional lines of therapies in relapsing patients. In contrast to NSCLC, in ALCL the clinical studies with TKI are at a very early stage and mechanisms of resistance are almost completely unknown. In this project, we aim at generating a comprehensive characterization of the molecular mechanisms that generate resistance to ALK TKI in ALCL. By hypothesis-driven or screening approaches, we will elucidate most of the resistance mechanisms and we will evaluate in pre-clinical studies additional therapeutic strategies that could be specifically used for each mechanism. Specifically, we will generate a comprehensive catalog of ALK mutations that confer resistance to TKI and their sensitivity to different ALK inhibitors. We will validate ad propose therapies for patients that become resistant by ALK amplification or PI3K upregulation. Finally we will use proteomic and genetic screens to discover novel mechanisms of resistance. Thus, our results will provide an experimental guide for the therapeutic management of lymphoma patients that develop resistance to ALK TKI.

Public Health Relevance

The use of personalized drugs that can block the function of specific oncogenes, such as the Anaplastic Lymphoma Kinase (ALK), has recently revolutionized the therapy of cancer. Unfortunately, these drugs are efficacious only for a short period of time because many tumors relapse as they become resistant to the drug. In this project, we aim at discovering these mechanisms of resistance with the ultimate goal of finding additional therapies to target them and to ultimate cure such patients.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA196703-04
Application #
9513463
Study Section
Cancer Genetics Study Section (CG)
Program Officer
Jhappan, Chamelli
Project Start
2015-07-16
Project End
2020-06-30
Budget Start
2018-07-01
Budget End
2019-06-30
Support Year
4
Fiscal Year
2018
Total Cost
Indirect Cost
Name
Boston Children's Hospital
Department
Type
DUNS #
076593722
City
Boston
State
MA
Country
United States
Zip Code
Cheong, Taek-Chin; Blasco, Rafael B; Chiarle, Roberto (2018) The CRISPR/Cas9 System as a Tool to Engineer Chromosomal Translocation In Vivo. Adv Exp Med Biol 1044:39-48
Sharma, Geeta Geeta; Mota, Ines; Mologni, Luca et al. (2018) Tumor Resistance against ALK Targeted Therapy-Where It Comes From and Where It Goes. Cancers (Basel) 10:
Compagno, Mara; Wang, Qi; Pighi, Chiara et al. (2017) Phosphatidylinositol 3-kinase ? blockade increases genomic instability in B cells. Nature 542:489-493
Gulluni, Federico; Martini, Miriam; De Santis, Maria Chiara et al. (2017) Mitotic Spindle Assembly and Genomic Stability in Breast Cancer Require PI3K-C2? Scaffolding Function. Cancer Cell 32:444-459.e7
Voena, Claudia; Varesio, Lydia M; Zhang, Liye et al. (2016) Oncogenic ALK regulates EMT in non-small cell lung carcinoma through repression of the epithelial splicing regulatory protein 1. Oncotarget 7:33316-30
Cheong, Taek-Chin; Compagno, Mara; Chiarle, Roberto (2016) Editing of mouse and human immunoglobulin genes by CRISPR-Cas9 system. Nat Commun 7:10934
Ceccon, Monica; Merlo, Maria Elena Boggio; Mologni, Luca et al. (2016) Excess of NPM-ALK oncogenic signaling promotes cellular apoptosis and drug dependency. Oncogene 35:3854-3865
Choudhari, Ramesh; Minero, Valerio Giacomo; Menotti, Matteo et al. (2016) Redundant and nonredundant roles for Cdc42 and Rac1 in lymphomas developed in NPM-ALK transgenic mice. Blood 127:1297-306
Voena, Claudia; Menotti, Matteo; Mastini, Cristina et al. (2015) Efficacy of a Cancer Vaccine against ALK-Rearranged Lung Tumors. Cancer Immunol Res 3:1333-1343