Cleft lip and palate is a common human developmental malformation that may require significant medical and surgical intervention. It is etiologically heterogeneous, being found as a component in over 100 individually rare syndromes and more commonly as isolated, non-syndromic cleft lip and palate (CL/P). Among the syndromic causes is Van der Woude Syndrome (VDWS) - a single gene autosomal dominant disorder that also includes lip pits as part of its expression. For non-syndromic CL/P, recent evidence suggests a single major gene may be causal in 1/3 of cases with the remainder multifactorially based. Rodent and in vitro human studies have suggested a role for growth factors or their receptors in CL/P. We propose to use naturally occurring DNA variants of growth factors (RFLPs) to characterize the major genes involved in VDWS and non-syndromic CL/P. Such characterization will not only serve to improve diagnosis, prevention and treatment of CL/P, but also will identify a paradigm for single gene disturbances of developmental regulation in man. We will begin by characterizing three groups of individuals with orofacial clefting: 500 probands with non-syndromic CL/P, 35 families with VDWS: and 100 sib pairs affected with non- syndromic CL/P. Complex segregation analysis to identify the role of a major gene will be done on families of the first group. A battery of growth factors, receptors and related genes will be obtained and characterized for restriction fragment length polymorphisms. These RFLPs will be used for association studies in the 500 non-syndromic CL/P individuals and for linkage analysis in the VDWS and affected sib pairs. The major genes identified in the association and linkage analysis will then be characterized using fine structure genetic mapping and DNA sequencing techniques.

Agency
National Institute of Health (NIH)
Institute
National Institute of Dental & Craniofacial Research (NIDCR)
Type
Research Project (R01)
Project #
5R01DE008559-03
Application #
3222338
Study Section
Epidemiology and Disease Control Subcommittee 2 (EDC)
Project Start
1988-07-01
Project End
1993-06-30
Budget Start
1990-07-01
Budget End
1991-06-30
Support Year
3
Fiscal Year
1990
Total Cost
Indirect Cost
Name
University of Iowa
Department
Type
Schools of Dentistry
DUNS #
041294109
City
Iowa City
State
IA
Country
United States
Zip Code
52242
Eshete, M A; Liu, H; Li, M et al. (2018) Loss-of-Function GRHL3 Variants Detected in African Patients with Isolated Cleft Palate. J Dent Res 97:41-48
Oseni, Ganiyu O; Jain, Deepti; Mossey, Peter A et al. (2018) Identification of paternal uniparental disomy on chromosome 22 and a de novo deletion on chromosome 18 in individuals with orofacial clefts. Mol Genet Genomic Med 6:924-932
Carlson, Jenna C; Nidey, Nichole L; Butali, Azeez et al. (2018) Genome-wide interaction studies identify sex-specific risk alleles for nonsyndromic orofacial clefts. Genet Epidemiol 42:664-672
Liu, Huan; Busch, Tamara; Eliason, Steven et al. (2017) Exome sequencing provides additional evidence for the involvement of ARHGAP29 in Mendelian orofacial clefting and extends the phenotypic spectrum to isolated cleft palate. Birth Defects Res 109:27-37
Carlson, Jenna C; Taub, Margaret A; Feingold, Eleanor et al. (2017) Identifying Genetic Sources of Phenotypic Heterogeneity in Orofacial Clefts by Targeted Sequencing. Birth Defects Res 109:1030-1038
Kutbi, Hebah; Wehby, George L; Moreno Uribe, Lina M et al. (2017) Maternal underweight and obesity and risk of orofacial clefts in a large international consortium of population-based studies. Int J Epidemiol 46:190-199
Parada-Sanchez, M T; Chu, E Y; Cox, L L et al. (2017) Disrupted IRF6-NME1/2 Complexes as a Cause of Cleft Lip/Palate. J Dent Res 96:1330-1338
Haaland, Øystein A; Jugessur, Astanand; Gjerdevik, Miriam et al. (2017) Genome-wide analysis of parent-of-origin interaction effects with environmental exposure (PoOxE): An application to European and Asian cleft palate trios. PLoS One 12:e0184358
Howe, B J; Cooper, M E; Wehby, G L et al. (2017) Dental Decay Phenotype in Nonsyndromic Orofacial Clefting. J Dent Res 96:1106-1114
Liu, Huan; Leslie, Elizabeth J; Carlson, Jenna C et al. (2017) Identification of common non-coding variants at 1p22 that are functional for non-syndromic orofacial clefting. Nat Commun 8:14759

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