Currently, five acyl-CoA dehydrogenase (ACDs) are known. These are short chain (SCAD), medium chain (MCAD), and long chain acyl-CoA dehydrogenases (LCAD), isovaleryl-CoA (IVD) and 2-methyl-branched chain acyl-CoA dehydrogenases (2-meBCAD). Electron transfer flavoprotein (ETF) serves as an electron acceptor for all ACDs. All ACDs are mitochondrial flavoproteins. They share a high degree of sequence similarity and belong to a gene family. Thus, their properties are similar, but ACDs discretely differ from each other in the chain length and configuration of their optimal substrate. Also, whereas LCAD, MCAD and SCAD catalyze the first reaction of the mitochondrial beta-oxidation of fatty acids, IVD and 2- meBCAD are involved in leucine and isoleucine/valine oxidation, respectively. Hence, the regulation of the first three may differ from those of the last two. The overall objectives of this proposal are (A) to characterize ACDs using site-directed mutagenesis techniques; (B) to search for the elements that regulate ACDs by studying the gene organization as well as by gene expression studies; and (C) to characterize several human ACD mutants using the site-directed mutagenesis and other molecular biological techniques. The individual projects are as follows: (1) Completion of the study of the structure of the IVD gene; (2) study of the organization of the SCAD and LCAD genes; (3) developmental and nutritional regulation of the tissue specific expression; (4) riboflavin-dependent expression of various ACDs; (5) structural basis of the substrate specificity: switching the chain length specificity of SCAD and LCAD; (6) structural basis of the substrate specificity: switching the substrate specificity of SCAD and IVD; (7) study of the catalytic and FAD-binding sties; (8) large scale preparation of normal human SCAD and IVD proteins for X-ray crystallographic study via prokaryotic expression; (9) characterization of the molecular defect of 304Glu-MCAD; (10) study of rare mutations of human MCAD; (11) the molecular and biochemical characterization of type II variant IVD; and (12) molecular characterization of human LCAD deficiency.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK038154-07
Application #
3237394
Study Section
Medical Biochemistry Study Section (MEDB)
Project Start
1987-01-01
Project End
1994-12-31
Budget Start
1993-01-15
Budget End
1993-12-31
Support Year
7
Fiscal Year
1993
Total Cost
Indirect Cost
Name
Yale University
Department
Type
Schools of Medicine
DUNS #
082359691
City
New Haven
State
CT
Country
United States
Zip Code
06520
Saijo, T; Kim, J J; Kuroda, Y et al. (1998) The roles of threonine-136 and glutamate-137 of human medium chain acyl-CoA dehydrogenase in FAD binding and peptide folding using site-directed mutagenesis: creation of an FAD-dependent mutant, T136D. Arch Biochem Biophys 358:49-57
Tanaka, K; Gregersen, N; Ribes, A et al. (1997) A survey of the newborn populations in Belgium, Germany, Poland, Czech Republic, Hungary, Bulgaria, Spain, Turkey, and Japan for the G985 variant allele with haplotype analysis at the medium chain Acyl-CoA dehydrogenase gene locus: clinical and evolutiona Pediatr Res 41:201-9
Saijo, T; Tanaka, K (1995) Isoalloxazine ring of FAD is required for the formation of the core in the Hsp60-assisted folding of medium chain acyl-CoA dehydrogenase subunit into the assembly competent conformation in mitochondria. J Biol Chem 270:1899-907
Saijo, T; Welch, W J; Tanaka, K (1994) Intramitochondrial folding and assembly of medium-chain acyl-CoA dehydrogenase (MCAD). Demonstration of impaired transfer of K304E-variant MCAD from its complex with hsp60 to the native tetramer. J Biol Chem 269:4401-8
Yamaguchi, S; Indo, Y; Coates, P M et al. (1993) Identification of very-long-chain acyl-CoA dehydrogenase deficiency in three patients previously diagnosed with long-chain acyl-CoA dehydrogenase deficiency. Pediatr Res 34:111-3
Nagao, M; Raymond, D; Kim, J et al. (1993) Improved PCR/NcoI method for the molecular diagnosis of medium chain acyl-CoA dehydrogenase deficiency using dried blood samples: two-stage amplification using two different sets of primers improves accuracy and sensitivity. Clin Chim Acta 220:165-74
Parimoo, B; Tanaka, K (1993) Structural organization of the human isovaleryl-CoA dehydrogenase gene. Genomics 15:582-90
Nagao, M; Parimoo, B; Tanaka, K (1993) Developmental, nutritional, and hormonal regulation of tissue-specific expression of the genes encoding various acyl-CoA dehydrogenases and alpha-subunit of electron transfer flavoprotein in rat. J Biol Chem 268:24114-24
Yokota, I; Saijo, T; Vockley, J et al. (1992) Impaired tetramer assembly of variant medium-chain acyl-coenzyme A dehydrogenase with a glutamate or aspartate substitution for lysine 304 causing instability of the protein. J Biol Chem 267:26004-10
Coates, P M; Indo, Y; Young, D et al. (1992) Immunochemical characterization of variant medium-chain acyl-CoA dehydrogenase in fibroblasts from patients with medium-chain acyl-CoA dehydrogenase deficiency. Pediatr Res 31:34-8

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