Discover and functionally characterize full-penetrance causes of nephrosis/FSGS. Chronic kidney diseases (CKD) take one of the highest tolls on human health, and their prevalence has been rising in the last 20 years. Nephrotic syndrome (NS) is defined by significant proteinuria, resulting in hypoalbuminemia and edema. It constitutes the second most frequent cause of CKD in children and young adults and is classified by response to a standardized steroid therapy as "steroid-sensitive" (SSNS) vs. "steroid-resistant" (SRNS). SRNS, with the renal histology of focal segmental glomerulosclerosis (FSGS), inevitably leads to CKD. FSGS carries a 33% risk of relapsing in a kidney transplant, causing recurrence of CKD. Since the pathogenesis of SRNS is unknown, no curative treatment is available. For SRNS, the primary causes (etiology) and disease mechanisms (pathogenesis) have been a conundrum for decades. However, gene identification of full-penetrance single-gene causes of NS (e.g. podocin) has identified the renal glomerular podocyte as the cell type at which disease mechanisms of SRNS converge. Within the previous funding period we defined genotype-phenotype correlations that allow for prognostic classification of SRNS variants. More importantly, by discovering mutations in the genes PLCE1 and COQ6, we identified by genetic mapping novel rare single-gene causes of NS that may be amenable to specific treatment. We now established a new approach of whole exome capture (WEC) and NextGen resequencing, combining it with prior homozygosity mapping (HM) to mitigate the weaknesses of the otherwise powerful WEC approach. We mapped recessive NS candidate loci in a worldwide cohort of 67 sibling cases with SRNS/SSNS. In this cohort, very recently, we identified by HM, WEC and MPS mutation of CUBN and ARHGDIA as novel single-gene causes of SRNS, and mutation of EMP2 as the first recognized cause of SSNS. We also established disease models in zebrafish and mice (for Coq6), which we will use for therapeutic studies on single-gene causes of SRNS. We, therefore will pursue the following specific aims (SAs): SA1. Discover novel single-gene causes of nephrosis by whole exome capture (WEC) and NextGen resequencing in >67 sib pairs with existing homozygosity mapping (HM) data. SA 2. Functionally characterize newly identified single-gene causes of SRNS/SSNS to delineate the pathogenesis. SA 3. For newly identified SRNS/SSNS genes study the gene function and therapeutic approaches in zebrafish and mouse models, including Coq6-/-.

Public Health Relevance

Chronic kidney diseases take one of the highest tolls on human health. Steroid-resistant nephrotic syndrome (SRNS) is a rare disease that constitutes the second most frequent cause of ESKD in children and young adults. No curative treatment is available. 25% of all SRNS cases are caused by recessive NPHS2/podocin mutations, and we recently demonstrated, by genetic mapping, that many additional single-gene causes of SRNS must exist. Identification of rare single-gene causes for SRNS has provided fundamental insights into disease mechanisms of nephrotic syndrome in children and adults. Recently, we introduced a new technology into gene discovery of rare recessive single-gene causes by developing a combined approach of homozygosity mapping with consecutive exon capture and large-scale sequencing. We have ascertained DNA samples and clinical data from over 2,600 families with SRNS world- wide and have clarified the molecular cause of SRNS in 15% of cases. We here propose to: 1) Discover novel single-gene causes of nephrosis by whole exome capture (WEC) and NextGen sequencing in >67 sib pairs with existing homozygosity mapping (HM) data;2) Functionally characterize the pathogenesis of newly identified single-gene causes of SRNS/SSNS;and 3) Study gene function and therapeutic approaches in zebrafish and mouse models for newly identified nephrosis genes including the Coq6-/- model that we have generated.

National Institute of Health (NIH)
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Research Project (R01)
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Cellular and Molecular Biology of the Kidney Study Section (CMBK)
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Rasooly, Rebekah S
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University of Michigan Ann Arbor
Schools of Medicine
Ann Arbor
United States
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Doimo, Mara; Trevisson, Eva; Airik, Rannar et al. (2014) Effect of vanillic acid on COQ6 mutants identified in patients with coenzyme Q10 deficiency. Biochim Biophys Acta 1842:1-6
Gee, Heon Yung; Ashraf, Shazia; Wan, Xiaoyang et al. (2014) Mutations in EMP2 cause childhood-onset nephrotic syndrome. Am J Hum Genet 94:884-90
Lovric, Svjetlana; Fang, Humphrey; Vega-Warner, Virginia et al. (2014) Rapid detection of monogenic causes of childhood-onset steroid-resistant nephrotic syndrome. Clin J Am Soc Nephrol 9:1109-16
Gee, Heon Yung; Saisawat, Pawaree; Ashraf, Shazia et al. (2013) ARHGDIA mutations cause nephrotic syndrome via defective RHO GTPase signaling. J Clin Invest 123:3243-53
Has, Cristina; Sparta, Giuseppina; Kiritsi, Dimitra et al. (2012) Integrin ýý3 mutations with kidney, lung, and skin disease. N Engl J Med 366:1508-14
Zhou, Weibin; Hildebrandt, Friedhelm (2012) Inducible podocyte injury and proteinuria in transgenic zebrafish. J Am Soc Nephrol 23:1039-47
Heeringa, Saskia F; Chernin, Gil; Chaki, Moumita et al. (2011) COQ6 mutations in human patients produce nephrotic syndrome with sensorineural deafness. J Clin Invest 121:2013-24
Mele, Caterina; Iatropoulos, Paraskevas; Donadelli, Roberta et al. (2011) MYO1E mutations and childhood familial focal segmental glomerulosclerosis. N Engl J Med 365:295-306
Ovunc, Bugsu; Otto, Edgar A; Vega-Warner, Virginia et al. (2011) Exome sequencing reveals cubilin mutation as a single-gene cause of proteinuria. J Am Soc Nephrol 22:1815-20
Baskin, Esra; Selda Bayrakci, Umut; Alehan, Fusun et al. (2011) Respiratory-chain deficiency presenting as diffuse mesangial sclerosis with NPHS3 mutation. Pediatr Nephrol 26:1157-61

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