We propose to develop a zone plate based, multi-keV x-ray imaging facility at the Stanford Synchrotron Radiation Laboratory (SSRL) that will be capable of imaging thick hydrated biological specimens with 20 nm resolution and provide three dimensional images using tomographic reconstruction. By using x-ray phase contrast imaging as well as contrasting agents and specific labels such as immunogold, quantum dots, or other labeling techniques developed for electron microscopy, the instrument will be a tool for mapping specific molecules in cells or cells in tissues. With the anticipated improvements in zone plate optics, we expect the resolution to ultimately reach or exceed 10 rim. This instrument is meant to be used by the biomedical research community at large, and therefore in its construction we will demonstrate its efficacy on two radically different biological problems: (1) mapping microbes and macromolecules in wound tissue and (2) determining the nanostructure of hydrated bone. This proposal combines the expertise of three collaborating organizations: Prof. P. Pianetta and Dr. K. Luening from SSRL with extensive experience in a wide range of x-ray techniques based on synchrotron radiation sources; Dr. E. Almeida (UCSF, NASA Ames Research Center) and Prof. M. van der Meulen (Cornell University) who are leaders in studies of the nanostructure of bone; and Dr. J. Trent (NASA Ames Research Center), an accomplished microbiologist, who has worked extensively in imaging microbes and macromolecules and currently heads a research team studying the microbial ecology of chronic wounds. The microscope will be purchased from Xradia Inc., a leader in developing nondestructive high-resolution x-ray imaging solutions using multi-keV x-rays produced by a laboratory x-ray source. Dr. Wenbing Yun, founder and president of Xradia, will serve as a consultant on the project to develop the techniques needed for achieving high resolution 2D and 3D images in phase contrast for real biological specimens.

Agency
National Institute of Health (NIH)
Institute
National Institute of Biomedical Imaging and Bioengineering (NIBIB)
Type
Research Project (R01)
Project #
5R01EB004321-03
Application #
7223484
Study Section
Special Emphasis Panel (ZRG1-BST-A (50))
Program Officer
Lopez, Hector
Project Start
2005-05-01
Project End
2009-04-30
Budget Start
2007-05-01
Budget End
2008-04-30
Support Year
3
Fiscal Year
2007
Total Cost
$559,195
Indirect Cost
Name
Stanford University
Department
Type
Organized Research Units
DUNS #
009214214
City
Stanford
State
CA
Country
United States
Zip Code
94305
Lin, Jeremy D; Jang, Andrew T; Kurylo, Michael P et al. (2017) Periodontal ligament entheses and their adaptive role in the context of dentoalveolar joint function. Dent Mater 33:650-666
Brock, Garry R; Chen, Julia T; Ingraffea, Anthony R et al. (2015) The Effect of Osteoporosis Treatments on Fatigue Properties of Cortical Bone Tissue. Bone Rep 2:8-13
Yang, Feifei; Liu, Yijin; Martha, Surendra K et al. (2014) Nanoscale morphological and chemical changes of high voltage lithium-manganese rich NMC composite cathodes with cycling. Nano Lett 14:4334-41
Kao, Thomas L; Shi, Crystal Y; Wang, Junyue et al. (2013) Nanoscale elemental sensitivity study of Nd?Fe??B using absorption correlation tomography. Microsc Res Tech 76:1112-7
Brock, Garry R; Kim, Grace; Ingraffea, Anthony R et al. (2013) Nanoscale examination of microdamage in sheep cortical bone using synchrotron radiation transmission x-ray microscopy. PLoS One 8:e57942
Boesenberg, Ulrike; Meirer, Florian; Liu, Yijin et al. (2013) Mesoscale phase distribution in single particles of LiFePO4 following lithium deintercalation. Chem Mater 25:1664-1672
Liu, Yijin; Meirer, Florian; Williams, Phillip A et al. (2012) TXM-Wizard: a program for advanced data collection and evaluation in full-field transmission X-ray microscopy. J Synchrotron Radiat 19:281-7
Liu, Yijin; Wang, Junyue; Hong, Youli et al. (2012) Extended depth of focus for transmission x-ray microscope. Opt Lett 37:3708-10
Liu, Yijin; Meirer, Florian; Wang, Junyue et al. (2012) 3D elemental sensitive imaging using transmission X-ray microscopy. Anal Bioanal Chem 404:1297-301
Liu, Yijin; Andrews, Joy C; Wang, Junyue et al. (2011) Phase retrieval using polychromatic illumination for transmission X-ray microscopy. Opt Express 19:540-5

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