The overall objectives are to develop nuclear magnetic resonance (NMR) techniques and use them in concert with other experimental approaches to elucidate the molecular structure and physiologic functions of selected membrane-targeting proteins involved in phototransduction in vision and other signal transduction processes. During the next five years, we will use nuclear magnetic resonance (NMR), fluorescence, microcalorimetry, spin-label EPR, x-ray crystallography, and computational analysis to delineate the structure, dynamics and mechanisms of a family of neuronal calcium sensor proteins (calcium-myristoyl switches) that serve as membrane- targeting regulators in calcium signaling and are linked to retinal and neurological diseases. Our studies will focus on retinal recoverin, involved in cancer-associated retinopathy;guanylate cyclase activating proteins (GCAPs);linked to autosomal dominant cone dystrophy;centrins, that control protein translocation in photoreceptors;and calcium binding protein-4 (CaBP4), implicated in congenital stationary night blindness. By continuing our intensive study of retinal recoverin and the GCAP proteins and by broadening its scope to encompass neuronal homologs and protein targets, we hope to gain an atomic-level understanding of how calcium sensor proteins operate in signal transduction and disease processes. In particular, we want to understand how covalently attached myristoyl groups work in concert with calcium-binding sites and target proteins to guide this family of proteins to specific membrane-bound targets.
The specific aims are 3-fold: (1) Determine atomic-level structures of the GCAP proteins bound to retinal guanylate cyclases (RetGCs) to elucidate the Ca2+-dependent activation mechanism of RetGCs and thus provide a structural basis for understanding mechanisms of visual recovery and retinal degenerative diseases;(2) Determine structures of centrin-1 bound to T?? to provide a structural basis for understanding the mechanism of light-dependent protein translocation and its role in light adaptation;(3) Determine atomic-level structures of the retinal calcium sensor protein (CaBP4) and its structural interaction with voltage-gated Ca2+ channels (CaV1.4) at the rod synapse to understand the Ca2+-dependent regulatory mechanism of ion channels linked to retinal diseases.
Calcium ion (Ca2+) in the cell is important for transmitting and regulating neural signals in vision. The goal of our research is to understand how calcium sensor proteins in the brain and retina transduce calcium signals and regulate the transport of cellular Ca2+ through ion channels during phototransduction and cell signaling.
|Turner, Matthew; Zhang, Yonghong; Carlson, Hanqian L et al. (2015) Chemical shift assignments of mouse HOXD13 DNA binding domain bound to duplex DNA. Biomol NMR Assign 9:267-70|
|Lim, Sunghyuk; Rockwell, Nathan C; Martin, Shelley S et al. (2014) Photoconversion changes bilin chromophore conjugation and protein secondary structure in the violet/orange cyanobacteriochrome NpF2164g3' [corrected]. Photochem Photobiol Sci 13:951-62|
|Lim, Sunghyuk; Rockwell, Nathan C; Martin, Shelley S et al. (2014) ¹H, ¹?N, and ¹³C chemical shift assignments of cyanobacteriochrome NpF2164g3 in the photoproduct state. Biomol NMR Assign 8:259-62|
|Li, Congmin; Ames, James B (2014) ¹H, ¹³C, and ¹?N chemical shift assignments of neuronal calcium sensor protein, hippocalcin. Biomol NMR Assign 8:63-6|
|Zhang, Yonghong; Matt, Lucas; Patriarchi, Tommaso et al. (2014) Capping of the N-terminus of PSD-95 by calmodulin triggers its postsynaptic release. EMBO J 33:1341-53|
|Peshenko, Igor V; Olshevskaya, Elena V; Lim, Sunghyuk et al. (2014) Identification of target binding site in photoreceptor guanylyl cyclase-activating protein 1 (GCAP1). J Biol Chem 289:10140-54|
|Park, Saebomi; Li, Congmin; Haeseleer, Françoise et al. (2014) Structural insights into activation of the retinal L-type Ca²? channel (Cav1.4) by Ca²?-binding protein 4 (CaBP4). J Biol Chem 289:31262-73|
|Park, Saebomi; Li, Congmin; Ames, James B (2014) ¹H, ¹?N, and ¹³C chemical shift assignments of murine calcium-binding protein 4. Biomol NMR Assign 8:361-4|
|Lim, Sunghyuk; Peshenko, Igor V; Dizhoor, Alexander M et al. (2013) Backbone (1)H, (13)C, and (15)N resonance assignments of guanylyl cyclase activating protein-1, GCAP1. Biomol NMR Assign 7:39-42|
|Li, Congmin; Enomoto, Masahiro; Rossi, Ana M et al. (2013) CaBP1, a neuronal Ca2+ sensor protein, inhibits inositol trisphosphate receptors by clamping intersubunit interactions. Proc Natl Acad Sci U S A 110:8507-12|
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