Our objective is to understand the biochemistry and cell biology of glycoprotein processing and secretion. Yeast, like higher mammalian cells, secrete glycoproteins by transport through a compartmentalized exocytotic pathway. Glc3Man9GlcNAc2, transferred to nascent peptides in the rough endoplasmic reticulum (RER), is processed in this compartment by removal of Glc3 and a specific Man to generate a homogeneous Man8GlcNAc2 """"""""processing intermediate,"""""""" which is elongated by Man transferases in subcombparments of the Golgi complex to a family of Man9-14GlcNAc2 species. Structurally, Man8-14GlcNAc2 from secreted invertase are homogeneous isomers defining the pathway of mannan synthesis on this enzyme. These studies will be extended by determining to what extent the invertase pathway reflects global glycan processing in yeast in general, and the processing of carboxypeptidase Y (CPY), a non-secreted glycoprotein targetted to the vacuole (the yeast lysosome counterpart), in particular. Invertase and CPY will be isolated from wild-type, alg3 and sec mutants which arrest exocytosis early in the pathway. Their endoglycosidase-released oligosaccharides will be purified and structures determined by high-field 1H NMR spectrsocopy, confirmed as necessary by fast atom bombardment/mass spectroscopy, exoglycosidase digestions and chemical means. Processing pathways will be compared to determine whether the sec mutants operationally define new compartments between the RER (sec18) and the trans Golgi (sec7) where glycan processing is complete. Immunoelectron microscopy will be used to localize invertase and CPY in normal and sec yeast to see whether they functionally traverse the secretory pathway together. The RER Alpha1,2-mannosidase will be purified and antibodies raised for immunoscreening yeast transformed with yeast genomic DNA to identify, isolate and clone this gene for studies on the in vivo significance of processing through Man9GlcNAc2. That a """"""""correct"""""""" carbohydrate configuration is indispensable for the proper function of certain glycoproteins is shown by the diverse array of human diseases resulting from the failure to correctly synthesize, process, or degrade their glycan moieties. Clearly, glycoproteins are one of the essential building blocks of integrated biological systems, and fundamental knowledge of how these products are made and function within the organism is essential to providing a rational basis for detecting, understanding and curing identifiable disease states.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM023900-12
Application #
3271927
Study Section
Physiological Chemistry Study Section (PC)
Project Start
1977-09-09
Project End
1992-03-31
Budget Start
1989-04-01
Budget End
1990-03-31
Support Year
12
Fiscal Year
1989
Total Cost
Indirect Cost
Name
Wadsworth Center
Department
Type
DUNS #
110521739
City
Menands
State
NY
Country
United States
Zip Code
12204
Trimble, Robert B; Lubowski, Catherine; Hauer 3rd, Charles R et al. (2004) Characterization of N- and O-linked glycosylation of recombinant human bile salt-stimulated lipase secreted by Pichia pastoris. Glycobiology 14:265-74
Andreishcheva, Ekaterina N; Kunkel, Jeremy P; Gemmill, Trent R et al. (2004) Five genes involved in biosynthesis of the pyruvylated Galbeta1,3-epitope in Schizosaccharomyces pombe N-linked glycans. J Biol Chem 279:35644-55
Cipollo, John F; Trimble, Robert B (2002) The Saccharomyces cerevisiae alg12delta mutant reveals a role for the middle-arm alpha1,2Man- and upper-arm alpha1,2Manalpha1,6Man- residues of Glc3Man9GlcNAc2-PP-Dol in regulating glycoprotein glycan processing in the endoplasmic reticulum and Golgi appa Glycobiology 12:749-62
Cipollo, John F; Trimble, Robert B (2002) Hypoglycosylation in the alg12delta yeast mutant destabilizes protease A and causes proteolytic loss of external invertase. Glycobiology 12:30G-3G
Cipollo, J F; Trimble, R B; Chi, J H et al. (2001) The yeast ALG11 gene specifies addition of the terminal alpha 1,2-Man to the Man5GlcNAc2-PP-dolichol N-glycosylation intermediate formed on the cytosolic side of the endoplasmic reticulum. J Biol Chem 276:21828-40
Cipollo, J F; Trimble, R B (2000) The accumulation of Man(6)GlcNAc(2)-PP-dolichol in the Saccharomyces cerevisiae Deltaalg9 mutant reveals a regulatory role for the Alg3p alpha1,3-Man middle-arm addition in downstream oligosaccharide-lipid and glycoprotein glycan processing. J Biol Chem 275:4267-77
Cipollo, J F; Trimble, R B; Rance, M et al. (2000) Two-dimensional relayed-rotating-frame overhauser spectroscopy (1)H NMR experiments for the selective identification of 1,2-glycosidic linkages in polysaccharides. Anal Biochem 278:52-8
Verostek, M F; Lubowski, C; Trimble, R B (2000) Selective organic precipitation/extraction of released N-glycans following large-scale enzymatic deglycosylation of glycoproteins. Anal Biochem 278:111-22
Gemmill, T R; Trimble, R B (1999) Schizosaccharomyces pombe produces novel Gal0-2Man1-3 O-linked oligosaccharides. Glycobiology 9:507-15
Gemmill, T R; Trimble, R B (1999) Overview of N- and O-linked oligosaccharide structures found in various yeast species. Biochim Biophys Acta 1426:227-37

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