The objective of this work is to understand the physiological role of enzymatic protein carboxyl methylation reactions in human tissues and other cells. We propose to continue our studies of an L-isoaspartyl/D-aspartyl methyltransferase (E.C. 2.1.1.77) that catalyzes the modification of damaged proteins containing these unusual residues. This enzyme is found in the cytosolic fraction of all mammalian tissues examined and recognizes the altered residues that result from spontaneous racemization, isomerization, and deamidation of normal L-aspartyl and L-asparaginyl residues in aged proteins. In model systems, the formation of methyl esters at L-isoaspartyl residues can lead to their conversion to L-aspartyl residues and suggests that this enzyme functions to repair certain types of covalent damage to intracellular proteins and limit their accumulation in aging cells. We will use a combination of biochemical and molecular biological techniques in in vitro and in intact cell systems, focusing particularly on human erythrocytes. Since the structure of this enzyme has been remarkably well conserved from bacteria to human cells, we will also utilize genetically-manipulatable microbial model systems. This methyltransferase may represent one of the first members of a class of enzymes that can check spontaneous damage to cellular proteins, and its disruption in pathological conditions may both decrease their useful lifetime and contribute to accelerated aging processes. our recent discovery of a new class of protein carboxyl methyltransferases suggests that these enzymes may also have roles in the regulation of cellular signalling reactions. Proteins that contain a C-terminal tetrapeptide sequence are modified by reactions that form C-terminal S-isoprenylated cysteine methyl esters. These proteins include the ras oncogene products as well as other small G-proteins, subunits of the large G-proteins, and nuclear lamin components. The isoprenylation and methylation of these proteins have been postulated to lead to both membrane association and to the control of their signalling activities. We will purify and characterize the enzymes involved in these reactions from both mammalian tissues and yeast. The ability to pharmacologically control these modification enzymes, and thus signalling proteins involved in cell division, may represent new therapies for cancer and other diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM026020-17
Application #
2174587
Study Section
Physiological Chemistry Study Section (PC)
Project Start
1978-12-01
Project End
1995-12-06
Budget Start
1994-12-01
Budget End
1995-12-06
Support Year
17
Fiscal Year
1995
Total Cost
Indirect Cost
Name
University of California Los Angeles
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
119132785
City
Los Angeles
State
CA
Country
United States
Zip Code
90095
Clarke, Steven G (2018) The ribosome: A hot spot for the identification of new types of protein methyltransferases. J Biol Chem 293:10438-10446
Kafková, Lucie; Debler, Erik W; Fisk, John C et al. (2017) The Major Protein Arginine Methyltransferase in Trypanosoma brucei Functions as an Enzyme-Prozyme Complex. J Biol Chem 292:2089-2100
Hadjikyriacou, Andrea; Clarke, Steven G (2017) Caenorhabditis elegans PRMT-7 and PRMT-9 Are Evolutionarily Conserved Protein Arginine Methyltransferases with Distinct Substrate Specificities. Biochemistry 56:2612-2626
Jain, Kanishk; Warmack, Rebeccah A; Debler, Erik W et al. (2016) Protein Arginine Methyltransferase Product Specificity Is Mediated by Distinct Active-site Architectures. J Biol Chem 291:18299-308
Al-Hadid, Qais; Roy, Kevin; Chanfreau, Guillaume et al. (2016) Methylation of yeast ribosomal protein Rpl3 promotes translational elongation fidelity. RNA 22:489-98
Caslavka Zempel, Katelyn E; Vashisht, Ajay A; Barshop, William D et al. (2016) Determining the Mitochondrial Methyl Proteome in Saccharomyces cerevisiae using Heavy Methyl SILAC. J Proteome Res 15:4436-4451
Lowenson, Jonathan D; Shmanai, Vadim V; Shklyaruck, Denis et al. (2016) Deuteration protects asparagine residues against racemization. Amino Acids 48:2189-96
Al-Hadid, Qais; White, Jonelle; Clarke, Steven (2016) Ribosomal protein methyltransferases in the yeast Saccharomyces cerevisiae: Roles in ribosome biogenesis and translation. Biochem Biophys Res Commun 470:552-557
Debler, Erik W; Jain, Kanishk; Warmack, Rebeccah A et al. (2016) A glutamate/aspartate switch controls product specificity in a protein arginine methyltransferase. Proc Natl Acad Sci U S A 113:2068-73
Hadjikyriacou, Andrea; Yang, Yanzhong; Espejo, Alexsandra et al. (2015) Unique Features of Human Protein Arginine Methyltransferase 9 (PRMT9) and Its Substrate RNA Splicing Factor SF3B2. J Biol Chem 290:16723-43

Showing the most recent 10 out of 199 publications