We will continue our study of genes needed for neuronal differentiation and function using the six touch receptor neurons (TRNs) in the nematode Caenorhabditis elegans. Previous research under this grant identified genes needed for the generation, specification, maintenance and function of the TRNs. In the last funding period we 1) identified genes needed for the specification of neuronal subtypes; 2) discovered a new activity (refinement) that maintains transcription factor expression by the restricting its stochastic expression; 3) examined the how the release of epigenetic inhibition affects the terminal differentiation of subtypes of motor neurons; 4) discovered several behaviors that modulate TRN touch sensitivity, including a previous unstudied type - long-term sensitization - and the mechanisms underlying these modulations; 5) identified a role for integrins and other focal adhesion proteins in neuronal mechano- sensation; 6) discovered that the alpha-tubulin acetyltransferase MEC-17 specifies the unusual, 15-protofilament structure of TRN microtubules; and 7) discovered a microtubule-based regulation of general cellular transcription/translation and the genes needed for it. We also introduced a method for feeding RNAi in neurons. We began successful mutageneses to obtain mutants defective in neuronal outgrowth and neuronal ensheathment, devised a new method to characterize habituation, and used this method to identify genes needed for habituation. The general goal of the research described in this proposal is to exploit these findings and methods to understand how the differentiation of individual cell types is controlled and how mechanical inputs are sensed and modified.
The specific aims of the proposal are 1) to discover and characterize genes needed for TRN differentiation, specifically those needed for the differences among TRNs and TRN process outgrowth and ensheathment; 2) to investigate touch sensitivity and its control by investigating newly identified lethal genes needed for touch sensitivity and testing and characterizing TRN-expressed genes for supersensitivity; and 3) to characterize modulation of touch sensitivity, including habituation. The health relatedness of our work comes from the discovery of new genes and new interactions among genes that are similar in humans and other mammals.

Public Health Relevance

We will continue to use the touch receptor neurons of the nematode Caenorhabditis elegans to study basic questions about nerve cell development (how subtle differences in cells arise, what factors affect cell outgrowth and ensheathment) and mechanosensation (how touch is sensed, how touch sensitivity is modulated). The importance of this research to public health derives from the similarity of the nematode genes to those of humans and the fact that, as many people have remarked, one must have something to translate to do translational research. Genetic approaches such as those that we use provide the new players and novel insights into biological functions that not only increase our general knowledge, but also provide new ways to address and understand the processes that go awry in disease.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM030997-34
Application #
9222020
Study Section
Neurodifferentiation, Plasticity, and Regeneration Study Section (NDPR)
Program Officer
Sesma, Michael A
Project Start
1982-08-01
Project End
2017-12-31
Budget Start
2017-01-01
Budget End
2017-12-31
Support Year
34
Fiscal Year
2017
Total Cost
Indirect Cost
Name
Columbia University (N.Y.)
Department
Biology
Type
Graduate Schools
DUNS #
049179401
City
New York
State
NY
Country
United States
Zip Code
10027
Shi, Lingyan; Zheng, Chaogu; Shen, Yihui et al. (2018) Optical imaging of metabolic dynamics in animals. Nat Commun 9:2995
Zheng, Chaogu; Jin, Felix Qiaochu; Trippe, Brian Loeber et al. (2018) Inhibition of cell fate repressors secures the differentiation of the touch receptor neurons of Caenorhabditis elegans. Development 145:
Shi, Shujie; Buck, Teresa M; Kinlough, Carol L et al. (2017) Regulation of the epithelial Na+ channel by paraoxonase-2. J Biol Chem 292:15927-15938
Zheng, Chaogu; Diaz-Cuadros, Margarete; Nguyen, Ken C Q et al. (2017) Distinct effects of tubulin isotype mutations on neurite growth in Caenorhabditis elegans. Mol Biol Cell 28:2786-2801
Chen, Yushu; Bharill, Shashank; Altun, Zeynep et al. (2016) Caenorhabditis elegans paraoxonase-like proteins control the functional expression of DEG/ENaC mechanosensory proteins. Mol Biol Cell 27:1272-85
Chen, Yushu; Bharill, Shashank; O'Hagan, Robert et al. (2016) MEC-10 and MEC-19 Reduce the Neurotoxicity of the MEC-4(d) DEG/ENaC Channel in Caenorhabditis elegans. G3 (Bethesda) 6:1121-30
Berg, Jeremy M; Bhalla, Needhi; Bourne, Philip E et al. (2016) SCIENTIFIC COMMUNITY. Preprints for the life sciences. Science 352:899-901
Zheng, Chaogu; Diaz-Cuadros, Margarete; Chalfie, Martin (2016) GEFs and Rac GTPases control directional specificity of neurite extension along the anterior-posterior axis. Proc Natl Acad Sci U S A 113:6973-8
Zheng, Chaogu; Chalfie, Martin (2016) Securing Neuronal Cell Fate in C. elegans. Curr Top Dev Biol 116:167-80
Corsi, Ann K; Wightman, Bruce; Chalfie, Martin (2015) A Transparent window into biology: A primer on Caenorhabditis elegans. WormBook :1-31

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