This proposal deals with kinetic studies of systems of enzymes and reactants which follow the direct transfer pathway for the transfer of metabolite from its enzyme site of synthesis to its enzyme site of utilization. The extent to which this mechanism is operative will be assessed by steady-state kinetic studies of the effectiveness with which an enzyme-metabolite complex (E1-M) is competent to serve as substrate in an E2 catalyzed reaction versus the aqueous solvated metabolite. Such a survey will be based primarily on the """"""""enzyme-buffer"""""""" technique which we have already described. Wherever the direct transfer of metabolite is the physiologically relevant pathway, we shall further investigate the details of the coupled direct transfer mechanism via transient rapid stopped-flow kinetic techniques involving substantial concentrations of both E1 and E2. These experiments will be performed under conditions such that the concentrations of enzyme sites (E1 and E2) exceed the concentration of common metabolite; conditions relevant to enzyme and metabolite intermediates in a metabolic pathway. The generality of the direct transfer mechanism will be probed among enzyme pairs and among more extended sequences of enzymes. These sequences are within the glycolytic and TCA cycles, and in the interconnections of these pathways with amino acid-, and fatty acid metabolism. We define a new type of """"""""chiral imprint"""""""" experiment which tests for the possibility of extensive, constrained metabolite. The molecular mechanism for the direct transfer of metabolite will be probed by computer graphic analysis of known three-dimensional structures wherever both direct transfer and structural information is available. The physiological significance of direct transfer which profoundly affect current views of the bioenergetics and regulations of metabolic pathways are discussed in this proposal.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM037056-03
Application #
3291986
Study Section
Biochemistry Study Section (BIO)
Project Start
1986-07-01
Project End
1989-08-14
Budget Start
1988-07-01
Budget End
1989-08-14
Support Year
3
Fiscal Year
1988
Total Cost
Indirect Cost
Name
University of Oregon
Department
Type
Organized Research Units
DUNS #
948117312
City
Eugene
State
OR
Country
United States
Zip Code
97403
Betts, G F; Srivastava, D K (1991) The rationalization of high enzyme concentration in metabolic pathways such as glycolysis. J Theor Biol 151:155-67
Bernhard, S A; Tompa, P (1990) The mechanism of succinate or fumarate transfer in the tricarboxylic acid cycle allows molecular rotation of the intermediate. Arch Biochem Biophys 276:191-8
Srivastava, D K; Smolen, P; Betts, G F et al. (1989) Direct transfer of NADH between alpha-glycerol phosphate dehydrogenase and lactate dehydrogenase: fact or misinterpretation? Proc Natl Acad Sci U S A 86:6464-8
Malhotra, O P; Bernhard, S A (1989) Noncovalent modulation by ATP of the acyl transfer from acyl-glyceraldehyde-3-phosphate dehydrogenase to phosphate. Biochemistry 28:124-8
Srivastava, D K; Bernhard, S A (1987) Biophysical chemistry of metabolic reaction sequences in concentrated enzyme solution and in the cell. Annu Rev Biophys Biophys Chem 16:175-204
Srivastava, D K; Bernhard, S A (1987) Mechanism of transfer of reduced nicotinamide adenine dinucleotide among dehydrogenases. Transfer rates and equilibria with enzyme-enzyme complexes. Biochemistry 26:1240-6
Bernhard, S A; Srivastava, D K (1987) Functional consequences of the direct transfer of metabolites in muscle glycolysis. Biochem Soc Trans 15:977-81
Bernhard, S A; Srivastava, D K (1987) Functional role of enzyme conformational changes in metabolism. Indian J Biochem Biophys 24:suppl 11-5
Srivastava, D K; Bernhard, S A (1986) Metabolite transfer via enzyme-enzyme complexes. Science 234:1081-6