This project is to study the dauer formation pathway in the nematode C. elegans. The dauer is an alternative L3 larval stage that the developing nematode follows under conditions of crowding and starvation. Previous work in several laboratories has resulted in the identification of a dauer-inducing pheromone and sensory neurons in the head of the nematode that regulate entrance into the dauer pathway. Genetic epistasis analysis of mutants that inappropriately enter the dauer pathway in the absence of pheromone, or alternatively that fail to enter the dauer pathway in the presence of pheromone, has allowed description of a genetic pathway of dauer regulation.
The aim of the present proposal is to further the understanding of the dauer pathway at the cellular and molecular levels. This research is a model for understanding chemosensory transduction and regulation of development by the environment.
The specific aims are as follows: 1) Further characterize the product of the daf-11 gene. This has been shown to be a transmembrane quanylyl cyclase thought to be involved in transducing the dauer pheromone signal in sensory neurons. Experiments include localization with antibodies and transgenes, structure/function analysis, and exploration of genetic interactions with a possible target gene, tax-4, which encodes a cGMP- activated ion channel. 2) Molecularly clone and analyze two genes of the dauer pathway: daf-21, thought to have a function closely related to daf-11, and daf-14, thought to act in a branch of the dauer pathway, and elsewhere, as part of a TGFbeta signalling pathway. 3) Extend the known cellular focus of the dauer pathway downstream of the sensory neurons by laser ablation of candidate interneurons. Interneurons selected will be those with an appropriate pattern of synaptic connectivity to sensory neurons, and those which are found to express molecular components of the dauer genetic pathway. 4) New genes of the dauer pathway will be sought in a genetic screen and placed in the dauer pathway by epistasis analysis. 5) Electrophysiological studies to test models of signal transduction in response to dauer pheromone will be carried out by developing patch clamping methodology for sensory neurons, or by studying individual molecular components in human epithelial kidney cells.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM048700-07
Application #
6018938
Study Section
Special Emphasis Panel (ZRG2-GEN (05))
Project Start
1993-08-01
Project End
2000-08-31
Budget Start
1999-08-01
Budget End
2000-08-31
Support Year
7
Fiscal Year
1999
Total Cost
Indirect Cost
Name
University of Washington
Department
Genetics
Type
Schools of Arts and Sciences
DUNS #
135646524
City
Seattle
State
WA
Country
United States
Zip Code
98195
Jafari, Gholamali; Burghoorn, Jan; Kawano, Takehiro et al. (2010) Genetics of extracellular matrix remodeling during organ growth using the Caenorhabditis elegans pharynx model. Genetics 186:969-82
Reiner, David J; Ailion, Michael; Thomas, James H et al. (2008) C. elegans anaplastic lymphoma kinase ortholog SCD-2 controls dauer formation by modulating TGF-beta signaling. Curr Biol 18:1101-9
Thomas, James H; Robertson, Hugh M (2008) The Caenorhabditis chemoreceptor gene families. BMC Biol 6:42
Thomas, James H (2006) Analysis of homologous gene clusters in Caenorhabditis elegans reveals striking regional cluster domains. Genetics 172:127-43
Robertson, Hugh M; Thomas, James H (2006) The putative chemoreceptor families of C. elegans. WormBook :1-12
Thomas, James H; Kelley, Joanna L; Robertson, Hugh M et al. (2005) Adaptive evolution in the SRZ chemoreceptor families of Caenorhabditis elegans and Caenorhabditis briggsae. Proc Natl Acad Sci U S A 102:4476-81
Stewart, Mary K; Clark, Nathaniel L; Merrihew, Gennifer et al. (2005) High genetic diversity in the chemoreceptor superfamily of Caenorhabditis elegans. Genetics 169:1985-96
Li, Jie; Brown, Gemma; Ailion, Michael et al. (2004) NCR-1 and NCR-2, the C. elegans homologs of the human Niemann-Pick type C1 disease protein, function upstream of DAF-9 in the dauer formation pathways. Development 131:5741-52
Kraemer, Brian C; Zhang, Bin; Leverenz, James B et al. (2003) Neurodegeneration and defective neurotransmission in a Caenorhabditis elegans model of tauopathy. Proc Natl Acad Sci U S A 100:9980-5
Schafer, Jenny C; Haycraft, Courtney J; Thomas, James H et al. (2003) XBX-1 encodes a dynein light intermediate chain required for retrograde intraflagellar transport and cilia assembly in Caenorhabditis elegans. Mol Biol Cell 14:2057-70

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