The long term objective of this study is to determine how RNA polymerase III (pol III) is recruited to structurally distinct promoters. It is likely that while the basal transcription complex is assembled differently on different promoters, one or more essential factors that recruit the polymerase may be shared by all the promotes. A likely candidate is transcription factor IIIB (TFIIIB) because in the yeast, Saccharmomyces cerevisiae, this complex is the only essential RNA pol III factor and contacts the enzyme directly. The mammalian TFIIIB complex appears to have more subunits than the yeast factor and its role in transcription is not clearly defined.
The specific aims of this project are: 1) -- to purify human TFIIIB and clone cDNAs encoding the subunits; 2) -- The clones will be used to overexpress the TFIIIB components for raising monoclonal antibodies and for functional studies; 3) -- The TFIIIB complex will be assembled in vitro from its components and the functions of the holo- and partial complexes evaluated in transcription from the human 5S, U6 and 7SL genes, the Adenovirus VA1 and the Epstein-Barr Virus EBER2 genes. The promoters of these genes represent the spectrum of structurally distinct RNA pol III promoters. Mutagenesis, biochemical assays and footprinting techniques will be used to define i) the interactions among the components of TFIIIB ii) the interactions with other known RNA polymerase III factors, RNA polymerase and DNA; 4) -- Transcription complexes will be assembled on the biochemically less well characterized 7SL and EBER2 promoters to determine which of the know RNA pol III factors are required. Potentially these studies will identify novel pol III factors. A knowledge of how RNA pol III recognises disparate promoters is important in understanding how transcription is regulated, and may ultimately provide a means for selectively inhibiting viral gene expression in human cells.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM051908-03
Application #
2022940
Study Section
Molecular Biology Study Section (MBY)
Project Start
1995-01-01
Project End
1999-12-31
Budget Start
1997-01-01
Budget End
1997-12-31
Support Year
3
Fiscal Year
1997
Total Cost
Indirect Cost
Name
University of Alabama Birmingham
Department
Biochemistry
Type
Schools of Dentistry
DUNS #
004514360
City
Birmingham
State
AL
Country
United States
Zip Code
35294