The mechanisms that control cell size are largely unknown and represent a fundamental unsolved problem in biology. The size of proliferating cells is controlled by cell size checkpoints, which ensure that key cell cycle transitions are initiated only when sufficient growth has occurred. Despite their name, it is uncertain whether cell size checkpoints monitor a parameter linked to cell size, such as volume or surface area, or whether they monitor parameters linked to growth or biosynthetic capacity. The signals that link the cell cycle to cell size have remained deeply mysterious. We discovered that protein phosphatase 2A associated with the Rts1 subunit (PP2ARts1) is required for cell size control in budding yeast. Importantly, cells that lack PP2ARts1 fail to modulate their size in response to nutrients, which suggests that PP2ARts1 functions in the enigmatic mechanisms that set cell size. We used quantitative proteome-wide mass spectrometry to discover targets of PP2ARts1, which revealed that PP2ARts1 is a master regulator of multiple cell size checkpoint pathways. This important discovery suggests that multiple seemingly independent cell size checkpoints may be linked to a common mechanism that measures cell growth. We further found that PP2ARts1 itself is controlled by phosphoinositide-dependent kinase 1 (PDK1), which plays conserved roles in control of cell growth and size. Together, our recent discoveries have led us to hypothesize that common signals, working through PDK1 and PP2ARts1, coordinately control cell growth and size. We further hypothesize that PP2ARts1 works in a mechanism that translates growth into a proportional checkpoint signal that can be read to determine when sufficient growth has occurred. The proposed Aims use a combination of genetics, biochemistry, proteomics and imaging to test these hypotheses, while also laying the groundwork for new breakthroughs in cell size control.

Public Health Relevance

Severe defects in cell size and shape are a nearly universal feature of cancer cells and have long been a basis of cancer pathology in the clinic. These defects may define a difference from normal cells that could be exploited to selectively kill cancer cells. To explore this novel idea, we need a better understanding of the mechanisms that control growth and size and how they go wrong in cancer cells.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM053959-18
Application #
8888932
Study Section
Nuclear and Cytoplasmic Structure/Function and Dynamics Study Section (NCSD)
Program Officer
Hamlet, Michelle R
Project Start
1996-07-01
Project End
2019-02-28
Budget Start
2015-05-01
Budget End
2016-02-29
Support Year
18
Fiscal Year
2015
Total Cost
$389,668
Indirect Cost
$116,513
Name
University of California Santa Cruz
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
125084723
City
Santa Cruz
State
CA
Country
United States
Zip Code
95064
Alcaide-Gavilán, Maria; Lucena, Rafael; Schubert, Katherine A et al. (2018) Modulation of TORC2 Signaling by a Conserved Lkb1 Signaling Axis in Budding Yeast. Genetics 210:155-170
Lucena, Rafael; Alcaide-Gavilán, Maria; Schubert, Katherine et al. (2018) Cell Size and Growth Rate Are Modulated by TORC2-Dependent Signals. Curr Biol 28:196-210.e4
Leitao, Ricardo M; Kellogg, Douglas R (2017) The duration of mitosis and daughter cell size are modulated by nutrients in budding yeast. J Cell Biol 216:3463-3470
Vadia, Stephen; Tse, Jessica L; Lucena, Rafael et al. (2017) Fatty Acid Availability Sets Cell Envelope Capacity and Dictates Microbial Cell Size. Curr Biol 27:1757-1767.e5
Zapata, Jessica; Dephoure, Noah; Macdonough, Tracy et al. (2014) PP2ARts1 is a master regulator of pathways that control cell size. J Cell Biol 204:359-76
Parnell, Emily J; Yu, Yaxin; Lucena, Rafael et al. (2014) The Rts1 regulatory subunit of PP2A phosphatase controls expression of the HO endonuclease via localization of the Ace2 transcription factor. J Biol Chem 289:35431-7
McCusker, Derek; Royou, Anne; Velours, Christophe et al. (2012) Cdk1-dependent control of membrane-trafficking dynamics. Mol Biol Cell 23:3336-47
McCusker, Derek; Kellogg, Douglas R (2012) Plasma membrane growth during the cell cycle: unsolved mysteries and recent progress. Curr Opin Cell Biol 24:845-51
Egelhofer, Thea A; Villen, Judit; McCusker, Derek et al. (2008) The septins function in G1 pathways that influence the pattern of cell growth in budding yeast. PLoS One 3:e2022
McCusker, Derek; Denison, Carilee; Anderson, Scott et al. (2007) Cdk1 coordinates cell-surface growth with the cell cycle. Nat Cell Biol 9:506-15

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