Successful transcriptional silencing of the majority of each eukaryotic genome is critical because inappropriate gene expression leads to disastrous consequences, including oncogenic transformation. The long-term goal of the proposed research is to understand fundamental mechanisms of transcriptional silencing. Discovery of homologs of the yeast silencing gene SIR2 from organisms as diverse as prokaryotes and mammals established an important new focus for studying silencing. Recent progress provides the first evidence for SIR-like silencing in humans and suggests that SIR2 silencing functions may be separated genetically. The primary goals of the research proposed are designed to address long-standing unanswered questions about SIR2 itself and specific questions and hypotheses raised in initial characterization of functionally conserved silencing domains. The project aims are to: .Extend biochemical and cell biological analyses of the SIR2 silencing protein. Pursue analysis of Sir2 protein domains identified for their significance in silencing and its specificity. Identify S1R2 interacting molecules in order to understand the mechanism of Sir2p's activity and regulation of its function.
These aims will be accomplished through genetic, biochemical and cell biological approaches. Results obtained will lead to greater knowledge of silenced chromatin complexes and mechanisms of transcriptional control and genomic regulation conserved from yeast to humans. Progress made understanding these centrally important regulatory mechanisms may ultimately lead to improved diagnostics and refined therapeutic and genetic interventions for human diseases resulting from loss of gene regulation.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
7R01GM054778-03
Application #
2869889
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1997-08-01
Project End
2001-07-31
Budget Start
1998-09-15
Budget End
1999-07-31
Support Year
3
Fiscal Year
1998
Total Cost
Indirect Cost
Name
University of California San Diego
Department
Biology
Type
Schools of Medicine
DUNS #
077758407
City
La Jolla
State
CA
Country
United States
Zip Code
92093
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Eustice, Moriah; Pillus, Lorraine (2014) Unexpected function of the glucanosyltransferase Gas1 in the DNA damage response linked to histone H3 acetyltransferases in Saccharomyces cerevisiae. Genetics 196:1029-39
Garza, Renee; Pillus, Lorraine (2013) STUbLs in chromatin and genome stability. Biopolymers 99:146-54
Freeman-Cook, Lisa L; Gomez, Eliana B; Spedale, Erik J et al. (2005) Conserved locus-specific silencing functions of Schizosaccharomyces pombe sir2+. Genetics 169:1243-60
Parsons, Xuejun Huang; Garcia, Sandra N; Pillus, Lorraine et al. (2003) Histone deacetylation by Sir2 generates a transcriptionally repressed nucleoprotein complex. Proc Natl Acad Sci U S A 100:1609-14
Landry, J; Sutton, A; Tafrov, S T et al. (2000) The silencing protein SIR2 and its homologs are NAD-dependent protein deacetylases. Proc Natl Acad Sci U S A 97:5807-11
Smith, J S; Brachmann, C B; Pillus, L et al. (1998) Distribution of a limited Sir2 protein pool regulates the strength of yeast rDNA silencing and is modulated by Sir4p. Genetics 149:1205-19