Bacterial multidrug resistance (mdr) is a significant problem in the treatment of most infectious diseases. This multidrug resistance is caused by the over-expression of drug efflux pumps that are located in the lipid bilayer of bacteria. An important class of mdr pumps in bacteria are the Small Multidrug Resistance (SMR) family of transporters. These transporters translocate hydrophobic cations through a coupling mechanism through the cell membrane using energy derived from H+ gradients. Recently, our laboratory has over-expressed, purified, and crystallized a full-length member of the SMR family. Our objective is to discover the molecular structural components that are involved in the translocation of multiple drug molecules through the cell membrane by SMR transporters and to understand the general transport mechanisms that confer the multidrug phenotype. A high-resolution atomic structure of a bacterial multidrug resistance SMR transporter will serve as an excellent model for other 12-TM antiporters that are involved in sugar, ion, amino acid, inorganic, and organic permeation through the membrane. An x-ray crystal structure of an SMR transporter could also provide structural information that will be useful for understanding more complicated yet homologous mammalian transporters. Our objectives are: ? ? 1. Over-expression and purification of SMR transporters and their homologs.2. Crystallization and x-ray data collection of SMR transporters.3. X-ray structure determination and refinement of SMR transporters.4. Structural studies of SMR transporters concerning substrate translocation.5. Structural studies of SMR transporters concerning substrate recognition.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
1R01GM067644-01
Application #
6559639
Study Section
Biophysical Chemistry Study Section (BBCB)
Program Officer
Chin, Jean
Project Start
2003-01-01
Project End
2006-12-31
Budget Start
2003-01-01
Budget End
2003-12-31
Support Year
1
Fiscal Year
2003
Total Cost
$375,400
Indirect Cost
Name
Scripps Research Institute
Department
Type
DUNS #
781613492
City
La Jolla
State
CA
Country
United States
Zip Code
92037
Chen, Yen-Ju; Pornillos, Owen; Lieu, Samantha et al. (2007) X-ray structure of EmrE supports dual topology model. Proc Natl Acad Sci U S A 104:18999-9004
Pornillos, Owen; Chang, Geoffrey (2006) Inverted repeat domains in membrane proteins. FEBS Lett 580:358-62
Pornillos, Owen; Chen, Yen-Ju; Chen, Andy P et al. (2005) X-ray structure of the EmrE multidrug transporter in complex with a substrate. Science 310:1950-3
Ma, Che; Chang, Geoffrey (2004) Structure of the multidrug resistance efflux transporter EmrE from Escherichia coli. Proc Natl Acad Sci U S A 101:2852-7