To ensure cell survival and maintain genomic integrity, chromosomes must be equally distributed to daughter cells during mitosis. The kinetochore is a specialized region of the chromosome that binds microtubules of the mitotic spindle. All eukaryotes use kinetochores to segregate chromosomes during mitosis but how the kinetochore is established and maintained on each eukaryotic chromosome is unknown. The chromatin of the kinetochore is unique in that histone H3 is replaced with the histone variant centromere protein A (Cenp-A). The incorporation of Cenp-A into chromatin identifies the chromosomal position of the kinetochore and is essential for kinetochore assembly. This proposal is focused on understanding how cells specify the position of the kinetochore and how kinetochores are assembled at that site. We propose genetic, biochemical and cell biological methods to understand how Cenp-A is specifically incorporated into chromatin. We will first identify and characterize factors that are important for establishing and maintaining Cenp-A at kinetochores. Our first specific aim is to identify genes that are important for Cenp-A localization by RNAi based screening of the Drosophila genome. Using affinity biochemistry we have isolated a chromatin-remodeling enzyme that binds specifically to Cenp-A. Our second specific aim is to characterize the function of this enzyme in centromeric chromatin formation. Our third specific aim is to use the cell free Xenopus egg extract system as an in vitro system to dissect the mechanisms of kinetochore assembly. By combining the discovery of proteins that regulate kinetochore assembly with in vitro systems and cellular assays to analyze their functions we hope to understand how kinetochores are specified and assembled. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM074728-02
Application #
7106564
Study Section
Special Emphasis Panel (ZRG1-NDT (01))
Program Officer
Carter, Anthony D
Project Start
2005-09-01
Project End
2010-08-31
Budget Start
2006-09-01
Budget End
2007-08-31
Support Year
2
Fiscal Year
2006
Total Cost
$260,972
Indirect Cost
Name
Stanford University
Department
Biochemistry
Type
Schools of Medicine
DUNS #
009214214
City
Stanford
State
CA
Country
United States
Zip Code
94305
Limouse, Charles; Bell, Jason C; Fuller, Colin J et al. (2018) Measurement of Mesoscale Conformational Dynamics of Freely Diffusing Molecules with Tracking FCS. Biophys J 114:1539-1550
Cao, Shengya; Zhou, Keda; Zhang, Zhening et al. (2018) Constitutive centromere-associated network contacts confer differential stability on CENP-A nucleosomes in vitro and in the cell. Mol Biol Cell 29:751-762
French, Bradley T; Westhorpe, Frederick G; Limouse, Charles et al. (2017) Xenopus laevis M18BP1 Directly Binds Existing CENP-A Nucleosomes to Promote Centromeric Chromatin Assembly. Dev Cell 42:190-199.e10
Shang, Wei-Hao; Hori, Tetsuya; Westhorpe, Frederick G et al. (2016) Acetylation of histone H4 lysine 5 and 12 is required for CENP-A deposition into centromeres. Nat Commun 7:13465
Miell, Matthew D D; Straight, Aaron F (2016) In Vitro Kinetochore Assembly. Methods Mol Biol 1413:111-33
Westhorpe, Frederick G; Fuller, Colin J; Straight, Aaron F (2015) A cell-free CENP-A assembly system defines the chromatin requirements for centromere maintenance. J Cell Biol 209:789-801
Westhorpe, Frederick G; Straight, Aaron F (2014) The centromere: epigenetic control of chromosome segregation during mitosis. Cold Spring Harb Perspect Biol 7:a015818
Lee, Carolyn S; Bhaduri, Aparna; Mah, Angela et al. (2014) Recurrent point mutations in the kinetochore gene KNSTRN in cutaneous squamous cell carcinoma. Nat Genet 46:1060-2
Miell, Matthew D D; Fuller, Colin J; Guse, Annika et al. (2013) CENP-A confers a reduction in height on octameric nucleosomes. Nat Struct Mol Biol 20:763-5
Earnshaw, W C; Allshire, R C; Black, B E et al. (2013) Esperanto for histones: CENP-A, not CenH3, is the centromeric histone H3 variant. Chromosome Res 21:101-6

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