The translation elongation cycle is the central process required for the correct decoding of mRNA into protein. Despite the extremely high level of fidelity that has been observed in this reaction, there are special circumstances that redefine the coding potential of a given mRNA. The incorporation of the 21st amino acid, selenocysteine (Sec), is one example. The transformation of a UGA stop codon into a Sec codon requires the utilization of a novel translation elongation factor (eEFSec), a selenocysteine insertion sequence (SECIS) element in the 3' untranslated region of selenoprotein mRNAs, and a novel SECIS binding protein termed SBP2. These factors act in concert to alter the coding potential of specific UGA codons by specifying the insertion of the Sec-specific tRNA, Sec-tRNASec. This process is required for the production of 25 human selenoproteins, many of which form an essential line of defense against oxidative stress. The proteins are also responsible for a myriad of other functions including thyroid hormone metabolism and maintaining proper sperm motility. We have recently demonstrated that the factors known to be essential for Sec incorporation are, in fact, sufficient. These factors include a specialized elongation factor (eEFSec), a SECIS binding protein (SBP2), a specialized transfer RNA (Sec-tRNASec) and mammalian ribosomes. Although some information about which protein domains are important for Sec incorporation activity, the mechanism by which these factors allow Sec incorporation is not known. A complete understanding of this process is required for three key reasons: 1) many selenoproteins are essential; 2) mutations in the SBP2 gene cause human disease; 3) modulation of selenoprotein production has tremendous potential to maximize the beneficial antioxidant effects of selenoproteins. We propose to address three central questions in this project: What is the molecular basis for the exquisite specificity of Sec incorporation at defined UGA codons? How are cellular dynamics involved in the specificity and efficiency of Sec incorporation? How does the 3' UTR regulate the efficient and processive incorporation of 10 selenocysteine residues into the plasma selenium carrier protein selenoprotein P (SEPP1)? Successful completion of these Aims will shed significant light on the molecular mechanism of Sec incorporation, setting the stage for identifying the means by which the process can be regulated in a clinical setting.

Public Health Relevance

of this project to public health lies in the importance of dietary selenium for the prevention of cancer, male infertility immune disorders, hypothyroidism and heart disease. This project aims to identify the molecular mechanisms by which all of the proteins that require selenium as a cofactor are synthesized.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM077073-13
Application #
9473048
Study Section
Integrative Nutrition and Metabolic Processes Study Section (INMP)
Program Officer
Barski, Oleg
Project Start
2006-01-06
Project End
2019-03-31
Budget Start
2018-04-01
Budget End
2019-03-31
Support Year
13
Fiscal Year
2018
Total Cost
Indirect Cost
Name
Rbhs-Robert Wood Johnson Medical School
Department
Biochemistry
Type
Schools of Medicine
DUNS #
078795875
City
Piscataway
State
NJ
Country
United States
Zip Code
Shetty, Sumangala P; Copeland, Paul R (2018) The Selenium Transport Protein, Selenoprotein P, Requires Coding Sequence Determinants to Promote Efficient Selenocysteine Incorporation. J Mol Biol 430:5217-5232
Shetty, Sumangala; Copeland, Paul R (2018) Molecular mechanism of selenoprotein P synthesis. Biochim Biophys Acta Gen Subj :
Shetty, Sumangala; Marsicano, John R; Copeland, Paul R (2018) Uptake and Utilization of Selenium from Selenoprotein P. Biol Trace Elem Res 181:54-61
Carlson, Bradley A; Lee, Byeong Jae; Tsuji, Petra A et al. (2018) Selenocysteine tRNA[Ser]Sec, the Central Component of Selenoprotein Biosynthesis: Isolation, Identification, Modification, and Sequencing. Methods Mol Biol 1661:43-60
Carlson, Bradley A; Gupta, Nirupama; Pinkerton, Mark H et al. (2017) The utilization of selenocysteine-tRNA[Ser]Sec isoforms is regulated in part at the level of translation in vitro. Translation (Austin) 5:e1314240
Dobosz-Bartoszek, Malgorzata; Pinkerton, Mark H; Otwinowski, Zbyszek et al. (2016) Crystal structures of the human elongation factor eEFSec suggest a non-canonical mechanism for selenocysteine incorporation. Nat Commun 7:12941
Dubey, Aditi; Copeland, Paul R (2016) The Selenocysteine-Specific Elongation Factor Contains Unique Sequences That Are Required for Both Nuclear Export and Selenocysteine Incorporation. PLoS One 11:e0165642
Shetty, Sumangala P; Copeland, Paul R (2015) Selenocysteine incorporation: A trump card in the game of mRNA decay. Biochimie 114:97-101
French, Rachel L; Gupta, Nirupama; Copeland, Paul R et al. (2014) Structural asymmetry of the terminal catalytic complex in selenocysteine synthesis. J Biol Chem 289:28783-94
Shetty, Sumangala P; Shah, Ravi; Copeland, Paul R (2014) Regulation of selenocysteine incorporation into the selenium transport protein, selenoprotein P. J Biol Chem 289:25317-26

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