Nitric oxide signaling is critical to several physiological functions, and dysfunction in the in this signaling cascade is implicated in multiple diseases such as erectile dysfunction, heart disease, neurodegeneration, stroke, hypertension, and gastrointestinal disease. Activation and deactivation of soluble guanylate cyclase (sGC) is of central importance in nitric oxide (NO) signaling. NO regulates sGC at two levels and this is consistent with numerous pharmacological observations of NO signaling that describe tonic and acute roles for NO. The amplitude and duration of these effects of NO in neuronal signaling, cardiac function, vascular tone and vasodilation are vital to the proper function of these systems, but the mechanism for two NO effects has not been thoroughly investigated. A new paradigm for NO signaling through sGC has emerged. Understanding how sGC switches from a low to high activation state is central to this new paradigm.
Our specific aims i nclude: (i) Characterization of NO activation of sGC, with emphasis on studies of the physiological relevance of low and high activity states, (ii) Characterization of the allosteric nucleotide and activator binding site(s), and the role of nucleotide in modulating NO activation of the enzyme, and (iii) determining the effect of oxidative damage to sGC and the role of this in human disease. Experimental approaches will include physical biochemical methods such as mass spectrometry and rapid-reaction kinetics, cloning, expression, purification and characterization of wild type and sitedirected mutants of sGC, and experiments in various cellular systems to extend the findings into an in vivo setting. It is a central goal of this proposal to develop an entirely new understanding of the complex relationship between NO and sGC. We seek to develop a complete molecular level view of sGC activation and deactivation by NO and nucleotides (ATP and GTP). The extension of this work into physiological function will provide a rational basis for the understanding and treatment of NO signaling disorders in human disease.

Public Health Relevance

Nitric oxide signaling in cyclicGMP is essential to the critical functions of the cardiovascular and central nervous systems. Nitric oxide directly regulates soluble guanylate cyclase, the enzyme responsible for cyclicGMP formation. Understanding how nitric oxide regulates this enzyme directly bears or normal function and will provide new therapeutic avenues for important and wide-ranging human diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM077365-03
Application #
7728873
Study Section
Macromolecular Structure and Function E Study Section (MSFE)
Program Officer
Anderson, Vernon
Project Start
2006-04-01
Project End
2011-08-31
Budget Start
2009-09-30
Budget End
2010-08-31
Support Year
3
Fiscal Year
2009
Total Cost
$297,384
Indirect Cost
Name
University of California Berkeley
Department
Miscellaneous
Type
Organized Research Units
DUNS #
124726725
City
Berkeley
State
CA
Country
United States
Zip Code
94704
Fernhoff, Nathaniel B; Derbyshire, Emily R; Underbakke, Eric S et al. (2012) Heme-assisted S-nitrosation desensitizes ferric soluble guanylate cyclase to nitric oxide. J Biol Chem 287:43053-62
Gunn, Alexander; Derbyshire, Emily R; Marletta, Michael A et al. (2012) Conformationally distinct five-coordinate heme-NO complexes of soluble guanylate cyclase elucidated by multifrequency electron paramagnetic resonance (EPR). Biochemistry 51:8384-90
Surmeli, Nur Basak; Marletta, Michael A (2012) Insight into the rescue of oxidized soluble guanylate cyclase by the activator cinaciguat. Chembiochem 13:977-81
Derbyshire, Emily R; Marletta, Michael A (2012) Structure and regulation of soluble guanylate cyclase. Annu Rev Biochem 81:533-59
Derbyshire, Emily R; Winter, Michael B; Ibrahim, Mohammed et al. (2011) Probing domain interactions in soluble guanylate cyclase. Biochemistry 50:4281-90
Tran, Rosalie; Weinert, Emily E; Boon, Elizabeth M et al. (2011) Determinants of the heme-CO vibrational modes in the H-NOX family. Biochemistry 50:6519-30
Ibrahim, Mohammed; Derbyshire, Emily R; Marletta, Michael A et al. (2010) Probing soluble guanylate cyclase activation by CO and YC-1 using resonance Raman spectroscopy. Biochemistry 49:3815-23
Derbyshire, Emily R; Deng, Sarah; Marletta, Michael A (2010) Incorporation of tyrosine and glutamine residues into the soluble guanylate cyclase heme distal pocket alters NO and O2 binding. J Biol Chem 285:17471-8
Ibrahim, Mohammed; Derbyshire, Emily R; Soldatova, Alexandra V et al. (2010) Soluble guanylate cyclase is activated differently by excess NO and by YC-1: resonance Raman spectroscopic evidence. Biochemistry 49:4864-71
Yoon, Jungjoo; Herzik Jr, Mark A; Winter, Michael B et al. (2010) Structure and properties of a bis-histidyl ligated globin from Caenorhabditis elegans. Biochemistry 49:5662-70

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