The regeneration of tissues and organs lost to injury or disease is a key goal of biomedicine. Induction of regeneration in clinical contexts will require a molecular dissection of the relevant patterning signals operating in animals that are able to regenerate. This field has been dominated by a focus on chemical signals and is ready for fresh approaches to the problem. Our lab merges functional physiology with molecular genetics to understand novel biophysical controls of patterning and use them to control tissue growth. When amputated, the Xenopus tail forms a regeneration bud that rapidly produces a perfect duplicate of the original tail, including nerves, blood vessels, and muscle. Using this powerful vertebrate system, we discovered that endogenous ion fluxes and membrane voltage gradients play a crucial role in regeneration. Our drug screen implicated a H+ pump, a K+ channel, and a Na+ channel as required for regeneration but not for wound healing or primary tail growth;the activity of these transporters establishes a moderate zone of depolarization in the bud that is crucial for regeneration. We used mutant transporter constructs to inhibit or rescue regeneration, demonstrating that H+ flux is necessary and sufficient for inducing regeneration. These biophysical events function upstream of and control: known regeneration marker expression, up-regulation of cell proliferation in the bud, and axon patterning. We propose to begin to understand the role of ion flux in regeneration by characterizing: (1) the time-course and properties of blastema currents, (2) the expression of implicated electrogenic genes, (3) the downstream steps linking membrane voltage to molecular and morphogenetic events during regeneration. Our data provide the first induction of regeneration by molecular modulation of ion flows, and the proposed work will answer the most important open questions in this new field. This proposal incorporates a high degree of novelty because it is focused on a paradigm that has not been previously addressed using molecular genetic tools: electrical controls of regeneration. It is high-reward because it would lay bare a new set of control parameters for the regeneration of a complex vertebrate structure (including spinal cord). This will have important implications for understanding basic morphogenetic mechanisms as well as establishing a foundation for promising medical approaches to augment or induce regeneration in non-regenerating tissues. The ability to regenerate tissues and organs is crucial to the medical management of injury, aging, infection, or surgical removal of cancer. Our work will provide an entirely new modality that may, one day, allow human beings to regenerate important tissues and organs (including muscle and spinal cord).

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM078484-05
Application #
8111705
Study Section
Development - 2 Study Section (DEV2)
Program Officer
Haynes, Susan R
Project Start
2008-08-01
Project End
2013-07-31
Budget Start
2011-08-01
Budget End
2013-07-31
Support Year
5
Fiscal Year
2011
Total Cost
$290,097
Indirect Cost
Name
Tufts University
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
073134835
City
Medford
State
MA
Country
United States
Zip Code
02155
Lobo, Daniel; Hammelman, Jennifer; Levin, Michael (2016) MoCha: Molecular Characterization of Unknown Pathways. J Comput Biol 23:291-7
Lobo, Daniel; Levin, Michael (2015) Inferring regulatory networks from experimental morphological phenotypes: a computational method reverse-engineers planarian regeneration. PLoS Comput Biol 11:e1004295
Spencer Adams, Dany; Lemire, Joan M; Kramer, Richard H et al. (2014) Optogenetics in Developmental Biology: using light to control ion flux-dependent signals in Xenopus embryos. Int J Dev Biol 58:851-61
Lobo, Daniel; Feldman, Erica B; Shah, Michelle et al. (2014) Limbform: a functional ontology-based database of limb regeneration experiments. Bioinformatics 30:3598-600
Adams, Dany S; Levin, Michael (2013) Endogenous voltage gradients as mediators of cell-cell communication: strategies for investigating bioelectrical signals during pattern formation. Cell Tissue Res 352:95-122
Lobo, Daniel; Malone, Taylor J; Levin, Michael (2013) Planform: an application and database of graph-encoded planarian regenerative experiments. Bioinformatics 29:1098-100
Levin, Michael (2013) Reprogramming cells and tissue patterning via bioelectrical pathways: molecular mechanisms and biomedical opportunities. Wiley Interdiscip Rev Syst Biol Med 5:657-76
Levin, Michael (2012) Molecular bioelectricity in developmental biology: new tools and recent discoveries: control of cell behavior and pattern formation by transmembrane potential gradients. Bioessays 34:205-17
Levin, Michael (2012) Morphogenetic fields in embryogenesis, regeneration, and cancer: non-local control of complex patterning. Biosystems 109:243-61
Tseng, Ai-Sun; Levin, Michael (2012) Transducing bioelectric signals into epigenetic pathways during tadpole tail regeneration. Anat Rec (Hoboken) 295:1541-51

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