Coupling kinetochore microtubule dynamics to chromosome motion Abstract: During cell division chromosomes must segregate equally to ensure the health and viability of the daughter cells. It is now well established that accurate chromosome segregation crucially depends on the force- transducing interactions between thread-like polymers (microtubules), and kinetochores, specialized chromosomal structures: when microtubules shorten, the chromosomes are transported to the opposite poles of a dividing cell. Loss of the proper connections between the kinetochores and shortening microtubules leads to a chromosome loss, and is one of the most significant causes of aneuploidy. However, the molecular mechanisms that ensure the stability of these dynamic connections are not known. Our long-term goal is to understand the fundamental biological functions: how the kinetochores of mitotic chromosomes are coupled to the dynamic microtubules ends and how these attachments remain stable under the load. In vitro, depolymerizing microtubules can move objects that are appropriately coupled to their shortening ends. Similar mechanisms are likely to play central role in the pole-directed chromosome movement. To study these processes in the quantitative and mechanistic way we have developed biophysical and single-molecule methods to dissect the interactions between isolated kinetochore proteins and dynamic microtubules in vitro under conditions that mimic aspects of normal kinetochore-microtubule attachments in cells. By using segmented polymers with photoliable plus-end caps we can trigger depolymerization in a highly controlled manner, which enables detailed analysis of disassembly-dependent forces. With these methods, here we seek to understand the molecular mechanisms of the microtubule-dependent coupling carried out by the essential human Ska1- complex, a presumptive functional homolog of the budding yeast Dam1.
Our Specific Aims are focused on determining the role of Ska1 oligomerization in assembling the microtubule tip-tracking structures and characterizing their ability to move processively with the shortening ends (Aim 1). We will critically examine how Ska1 captures the energy of microtubule depolymerization, and compare its efficiency with that of the Dam1 ring (Aim 2). To determine how purified Ska1 maintains stable attachment to the shortening polymer, we will use purified Ska1 to couple microtubules to glass microspheres, and examine their motions under a load applied with laser tweezers (Aim 3). This approach is innovative because it focuses sophisticated biophysical methodologies on specific coupling kinetochore complexes, which are essential for accurate inheritance of genetic information. This research is important because it will promote identification of the biomechanical features and specific protein modules that are responsible for a kinetochore's ability to slide along microtubule wall, to withstand counter-forces and to respond to maladaptive conditions in a noisy and stochastic environment of a dividing mammalian cell. Ultimately, this work will facilitate analysis of human diseases, such as cancer, in which accurate chromosome segregation fails.

Public Health Relevance

The proposed research is relevant to public health because rigorous study of the dynamic linkages between spindle microtubules and chromosomal kinetochores will facilitate identification of the specific features of these force-transducing lins, which may be exploited for a selective disruption of kinetochore-microtubule interactions, thereby facilitating development of novel anti-cancer drugs. Thus, the proposed research is relevant to NIH's mission to foster fundamental creative discoveries that would ultimately advance our capacity to protect and improve human health.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
1R01GM098389-01A1
Application #
8293799
Study Section
Nuclear and Cytoplasmic Structure/Function and Dynamics Study Section (NCSD)
Program Officer
Deatherage, James F
Project Start
2012-09-30
Project End
2017-08-31
Budget Start
2012-09-30
Budget End
2013-08-31
Support Year
1
Fiscal Year
2012
Total Cost
$304,000
Indirect Cost
$114,000
Name
University of Pennsylvania
Department
Physiology
Type
Schools of Medicine
DUNS #
042250712
City
Philadelphia
State
PA
Country
United States
Zip Code
19104
Gudimchuk, Nikita; Tarasovetc, Ekaterina V; Mustyatsa, Vadim et al. (2018) Probing Mitotic CENP-E Kinesin with the Tethered Cargo Motion Assay and Laser Tweezers. Biophys J 114:2640-2652
Chakraborty, Manas; Tarasovetc, Ekaterina V; Grishchuk, Ekaterina L (2018) In vitro reconstitution of lateral to end-on conversion of kinetochore-microtubule attachments. Methods Cell Biol 144:307-327
Grishchuk, Ekaterina L (2017) Biophysics of Microtubule End Coupling at the Kinetochore. Prog Mol Subcell Biol 56:397-428
Monda, Julie K; Whitney, Ian P; Tarasovetc, Ekaterina V et al. (2017) Microtubule Tip Tracking by the Spindle and Kinetochore Protein Ska1 Requires Diverse Tubulin-Interacting Surfaces. Curr Biol 27:3666-3675.e6
Barisic, Marin; Silva e Sousa, Ricardo; Tripathy, Suvranta K et al. (2015) Mitosis. Microtubule detyrosination guides chromosomes during mitosis. Science 348:799-803
Zakharov, Pavel; Gudimchuk, Nikita; Voevodin, Vladimir et al. (2015) Molecular and Mechanical Causes of Microtubule Catastrophe and Aging. Biophys J 109:2574-2591
Zaytsev, Anatoly V; Mick, Jeanne E; Maslennikov, Evgeny et al. (2015) Multisite phosphorylation of the NDC80 complex gradually tunes its microtubule-binding affinity. Mol Biol Cell 26:1829-44
Vitre, Benjamin; Gudimchuk, Nikita; Borda, Ranier et al. (2014) Kinetochore-microtubule attachment throughout mitosis potentiated by the elongated stalk of the kinetochore kinesin CENP-E. Mol Biol Cell 25:2272-81
Zaytsev, Anatoly V; Sundin, Lynsie J R; DeLuca, Keith F et al. (2014) Accurate phosphoregulation of kinetochore-microtubule affinity requires unconstrained molecular interactions. J Cell Biol 206:45-59
Kononova, Olga; Kholodov, Yaroslav; Theisen, Kelly E et al. (2014) Tubulin bond energies and microtubule biomechanics determined from nanoindentation in silico. J Am Chem Soc 136:17036-45

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