The overall goal of this project is to understand the nuclear regulatory components that control cardiac-specific gene transcription. The precise mechanisms that control cardiac specific gene expression are unknown but members of three transcription factor families (MEF-2, GATA and TEF-1) appear to control expression of most cardiac genes characterized to date. In the present proposal, we will analyze the molecular interactions between two distinct regulatory domains that control cardiac-specific transcription of the cardiac troponin T gene (cTNT). Deletion of either regulatory element reduces activity of cTNT promoter constructs transfected into cultured cardiac myocytes to background levels, indicating both are necessary. One regulatory domain (dubbed the """"""""Cardiac Element"""""""") contains binding sites for both GATA and MEF-2 and lies 200 nucleotides upstream of the transcription initiation site. The other regulatory domain lies within the proximal promoter region (less than 100 nucleotides upstream of the transcription initiation site) and contains two MCAT elements which are binding sites for members of the TEF-1 transcription factor family, and a novel co- binding factor, poly (ADP-ribose) polymerase (PARP), recently discovered in this laboratory to play a central and obligatory role in the control of cell-selective transcription by one of the two MCAT elements. The proposed experiments involve detailed analyses of the molecular interactions that occur between transcription factors bound to the cardiac element and those bound to the MCAT elements with the overall goal of elucidating how they collaborate to activate transcription specifically in cardiac myocytes but keep it inactive in other cell types. Because the central factors involved in the regulation of the cTNT gene are also known to be active in the regulation of other cardiac genes we anticipate that our findings regarding their molecular interactions will be generally relevant to the regulation of diverse cardiac genes. In addition, parallel studies comparing the roles of these cardiac gene regulatory domains in transgenic mice versus cultured cardiac myocytes will indicate the degree to which in vitro studies are predictive of mechanisms of gene regulation in vivo. Such direct comparisons are crucial to understand the cardiac gene regulatory mechanisms operating under physiological conditions within the whole animal and, ultimately, in context of cardiac pathologies, including myocardial hypertrophy.

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Project (R01)
Project #
5R01HL035561-16
Application #
6388987
Study Section
Special Emphasis Panel (ZRG4-CVB (02))
Program Officer
Wang, Lan-Hsiang
Project Start
1985-09-30
Project End
2003-06-30
Budget Start
2001-07-01
Budget End
2002-06-30
Support Year
16
Fiscal Year
2001
Total Cost
$246,204
Indirect Cost
Name
University of California San Francisco
Department
Anatomy/Cell Biology
Type
Schools of Medicine
DUNS #
073133571
City
San Francisco
State
CA
Country
United States
Zip Code
94143
Kun, Ernest; Kirsten, Eva; Bauer, Pal I et al. (2006) Quantitative correlation between cellular proliferation and nuclear poly (ADP-ribose) polymerase (PARP-1). Int J Mol Med 17:293-300
Bauer, Pal I; Kenesi, Erzsebet; Mendeleyev, Jerome et al. (2005) The influence of ATP on poly(ADP-ribose) metabolism. Int J Mol Med 16:321-4
Bauer, Pal I; Kirsten, Eva; Kun, Ernest (2005) Mechanisms of antitumor action of methyl-3,5-diiodo-4-(4'-methoxyphenoxy)benzoate: drug-induced protein dephosphorylations and inhibition of the permissive action of ceramide on growth factor induced cell proliferation. Oncol Rep 13:465-8
Huang, Kai; Tidyman, William E; Le, Kim-Uyen T et al. (2004) Analysis of nucleotide sequence-dependent DNA binding of poly(ADP-ribose) polymerase in a purified system. Biochemistry 43:217-23
Kun, Ernest; Kirsten, Eva; Mendeleyev, Jerome et al. (2004) Regulation of the enzymatic catalysis of poly(ADP-ribose) polymerase by dsDNA, polyamines, Mg2+, Ca2+, histones H1 and H3, and ATP. Biochemistry 43:210-6
Kirsten, Eva; Kun, Ernest; Mendeleyev, Jerome et al. (2004) Activity assays for poly-ADP ribose polymerase. Methods Mol Biol 287:137-49
Tidyman, William E; Sehnert, Amy J; Huq, Anja et al. (2003) In vivo regulation of the chicken cardiac troponin T gene promoter in zebrafish embryos. Dev Dyn 227:484-96
Kun, Ernest; Kirsten, Eva; Ordahl, Charles P (2002) Coenzymatic activity of randomly broken or intact double-stranded DNAs in auto and histone H1 trans-poly(ADP-ribosylation), catalyzed by poly(ADP-ribose) polymerase (PARP I). J Biol Chem 277:39066-9
Butler, A J; Ordahl, C P (1999) Poly(ADP-ribose) polymerase binds with transcription enhancer factor 1 to MCAT1 elements to regulate muscle-specific transcription. Mol Cell Biol 19:296-306
Dockter, J L; Ordahl, C P (1998) Determination of sclerotome to the cartilage fate. Development 125:2113-24

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