The purpose of this proposal is to identify the quantitative trait loci (QTL) that control blood pressure (BP) in the Dahl salt sensitive (S) rat. Multiple linkage analyses, each using the S rat as one of the parental strains, has resulted in the identification of at least 16 different QTL on the S rat genome that control blood pressure. The locations of 7 of these QTL on rat chromosomes 1, 2, 3, 5, 7, 9 and 10 have been confirmed and well defined by the construction of congenic rat strains. Each congenic strain contains a genomic segment from a relatively normotensive strain introgressed into the S rat genome and has significantly lower BP compared to the S rat. Congenic strains containing low BP QTL alleles on rat chromosomes 1 and 5 are the major focus for this proposal. These represent a unique research resource, by having their chromosomal locations delimited to precisely defined genomic intervals. Positional cloning of each of these QTL, while desirable, is a slow and laborious process. The overall strategy of this proposal is to couple congenic mapping of these BP QTL with gene expression analysis, thus providing the opportunity to expedite the process of BP QTL identification. We propose to address two questions using two approaches: Question (1) What is the identity of the BP causative gene within a QTL? Question (2) What is its action? Question 1 will be addressed by constructing and using a congenic-interval specific oligonucleotide array to identify differentially expressed genes between S rats and congenic rats. Question 2 will be addressed by using an already available rat genome chip, to identify the genes whose mRNA expression levels are affected by the causative gene. ? ?

Agency
National Institute of Health (NIH)
Institute
National Heart, Lung, and Blood Institute (NHLBI)
Type
Research Project (R01)
Project #
5R01HL075414-03
Application #
7064872
Study Section
Genome Study Section (GNM)
Program Officer
Ye, Jane
Project Start
2004-07-01
Project End
2008-05-31
Budget Start
2006-06-01
Budget End
2007-05-31
Support Year
3
Fiscal Year
2006
Total Cost
$339,801
Indirect Cost
Name
University of Toledo
Department
Physiology
Type
Schools of Medicine
DUNS #
807418939
City
Toledo
State
OH
Country
United States
Zip Code
43614
Gopalakrishnan, Kathirvel; Kumarasamy, Sivarajan; Mell, Blair et al. (2015) Genome-wide identification of long noncoding RNAs in rat models of cardiovascular and renal disease. Hypertension 65:200-10
Joe, Bina; Saad, Yasser; Dhindaw, Seema et al. (2009) Positional identification of variants of Adamts16 linked to inherited hypertension. Hum Mol Genet 18:2825-38
Cicila, George T; Morgan, Eric E; Lee, Soon Jin et al. (2009) Epistatic genetic determinants of blood pressure and mortality in a salt-sensitive hypertension model. Hypertension 53:725-32
Toland, Edward J; Saad, Yasser; Yerga-Woolwine, Shane et al. (2008) Closely linked non-additive blood pressure quantitative trait loci. Mamm Genome 19:209-18
Liang, Mingyu; Lee, Norman H; Wang, Hongying et al. (2008) Molecular networks in Dahl salt-sensitive hypertension based on transcriptome analysis of a panel of consomic rats. Physiol Genomics 34:54-64
Saad, Yasser; Toland, Edward J; Yerga-Woolwine, Shane et al. (2008) Congenic mapping of a blood pressure QTL region on rat chromosome 10 using the Dahl salt-sensitive rat with introgressed alleles from the Milan normotensive strain. Mamm Genome 19:85-91
Lee, Norman H; Haas, Brian J; Letwin, Noah E et al. (2007) Cross-talk of expression quantitative trait loci within 2 interacting blood pressure quantitative trait loci. Hypertension 50:1126-33
Lee, Norman H (2007) Physiogenomic strategies and resources to associate genes with rat models of heart, lung and blood disorders. Exp Physiol 92:992-1002
Joe, Bina; Letwin, Noah E; Garrett, Michael R et al. (2005) Transcriptional profiling with a blood pressure QTL interval-specific oligonucleotide array. Physiol Genomics 23:318-26