Agency
National Institute of Health (NIH)
Institute
National Library of Medicine (NLM)
Type
Research Project (R01)
Project #
3R01LM006780-04S1
Application #
6687246
Study Section
Biomedical Library and Informatics Review Committee (BLR)
Program Officer
Sim, Hua-Chuan
Project Start
1999-07-01
Project End
2005-06-30
Budget Start
2002-07-01
Budget End
2003-06-30
Support Year
4
Fiscal Year
2003
Total Cost
$102,894
Indirect Cost
Name
University of California San Francisco
Department
Internal Medicine/Medicine
Type
Schools of Medicine
DUNS #
094878337
City
San Francisco
State
CA
Country
United States
Zip Code
94143
Sim, Ida; Tu, Samson W; Carini, Simona et al. (2014) The Ontology of Clinical Research (OCRe): an informatics foundation for the science of clinical research. J Biomed Inform 52:78-91
Tu, Samson W; Peleg, Mor; Carini, Simona et al. (2011) A practical method for transforming free-text eligibility criteria into computable criteria. J Biomed Inform 44:239-50
Ross, Jessica; Tu, Samson; Carini, Simona et al. (2010) Analysis of eligibility criteria complexity in clinical trials. AMIA Jt Summits Transl Sci Proc 2010:46-50
Kiritchenko, Svetlana; de Bruijn, Berry; Carini, Simona et al. (2010) ExaCT: automatic extraction of clinical trial characteristics from journal publications. BMC Med Inform Decis Mak 10:56
Sim, Ida; Carini, Simona; Tu, Samson et al. (2010) The human studies database project: federating human studies design data using the ontology of clinical research. AMIA Jt Summits Transl Sci Proc 2010:51-5
de Bruijn, Berry; Carini, Simona; Kiritchenko, Svetlana et al. (2008) Automated information extraction of key trial design elements from clinical trial publications. AMIA Annu Symp Proc :141-5
Lee, Kirby; Bacchetti, Peter; Sim, Ida (2008) Publication of clinical trials supporting successful new drug applications: a literature analysis. PLoS Med 5:e191
Berlin, Amy; Sorani, Marco; Sim, Ida (2006) A taxonomic description of computer-based clinical decision support systems. J Biomed Inform 39:656-67
Sim, Ida; Olasov, Ben; Carini, Simona (2004) An ontology of randomized controlled trials for evidence-based practice: content specification and evaluation using the competency decomposition method. J Biomed Inform 37:108-19
Sim, Ida; Carini, Simona; Olasov, Ben et al. (2004) Trial bank publishing: phase I results. Medinfo 11:1476-80

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