Scope of the Proposal This proposal seeks to characterize the basic biophysical mechanisms of nucleocytoplasmic transport to provide a firm understanding of how transport maintains, or through dysfunction fails to maintain in cells. Background/Intellectual Merit Nuclear pore complexes (NPCs) span the nuclear envelope and enable bidirectional transport between the cytoplasm and nucleus in eukaryotic cells. Small molecules (<40kDa) passively diffuse through the NPCs. However, translocation of large molecules (up to 50 MDa) is hindered by the phenylalanine-glycine (FG) repeats barrier inside the NPCs unless they are chaperoned by transport receptors. However, challenged by measuring the spatial structure of FG repeats and a series of transient interactions between the transport receptors and the FG repeats, the precise transport mechanism remains in dispute. To refine the transport mechanism, PI proposes an innovative expanded single molecule method to attack the challenges. Research Approach/Specific Aims The PI's lab develops a novel single-molecule approach, single-point edge-excitation sub-diffraction (SPEED) microscopy, to test nuclear transport models with a spatiotemporal resolution of 9 nm and 400 Specific aim 1 &2 will examine the hypothesis that small molecules diffuse through a central channel, and that small and large molecules spatially separate their pathways.
Specific aim 3 will examine whether the transport receptors repulse the FG-repeats filaments or dissolve into their meshwork, and whether the permeable barrier only anchors at the NPC center or spans the NPC. Significance/Broader Impacts Dysfunctions of the nuclear transport system are linked to numerous human diseases including leukemias, cancers, and primary biliary cirrhosis. The above proposed investigations will fundamentally advance our understanding of the nuclear transport mechanism and help distinguish among the current transport models. Advances expected from this work will directly impact our understanding and development of therapeutics for a number of human diseases.

Public Health Relevance

Dysfunctions of the nuclear transport system are linked to numerous human diseases including leukemias, cancers, and primary biliary cirrhosis. Understanding of nuclear transport mechanism will directly impact our understanding and development of therapeutics for a number of human diseases. In this proposal, we employ novel single molecule approaches to further unravel the nuclear transport mechanism.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Academic Research Enhancement Awards (AREA) (R15)
Project #
1R15GM094041-01
Application #
7940529
Study Section
Special Emphasis Panel (ZRG1-BST-Q (52))
Program Officer
Ainsztein, Alexandra M
Project Start
2010-04-01
Project End
2012-07-31
Budget Start
2010-04-01
Budget End
2012-07-31
Support Year
1
Fiscal Year
2010
Total Cost
$347,500
Indirect Cost
Name
Bowling Green State University
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
617407325
City
Bowling Green
State
OH
Country
United States
Zip Code
43403
Li, Yichen; Luo, Wangxi; Yang, Weidong (2018) Nuclear Transport and Accumulation of Smad Proteins Studied by Single-Molecule Microscopy. Biophys J 114:2243-2251
Mudumbi, Krishna C; Yang, Weidong (2017) Determination of Membrane Protein Distribution on the Nuclear Envelope by Single-Point Single-Molecule FRAP. Curr Protoc Cell Biol 76:21.11.1-21.11.13
Ma, Jiong; Kelich, Joseph M; Junod, Samuel L et al. (2017) Super-resolution mapping of scaffold nucleoporins in the nuclear pore complex. J Cell Sci 130:1299-1306
Mudumbi, Krishna C; Schirmer, Eric C; Yang, Weidong (2016) Single-point single-molecule FRAP distinguishes inner and outer nuclear membrane protein distribution. Nat Commun 7:12562
Ma, Jiong; Kelich, Joseph M; Yang, Weidong (2016) SPEED Microscopy and Its Application in Nucleocytoplasmic Transport. Methods Mol Biol 1411:503-18
Ma, Jiong; Goryaynov, Alexander; Yang, Weidong (2016) Super-resolution 3D tomography of interactions and competition in the nuclear pore complex. Nat Struct Mol Biol 23:239-47
Ruba, Andrew; Yang, Weidong (2016) O-GlcNAc-ylation in the Nuclear Pore Complex. Cell Mol Bioeng 9:227-233
Kelich, Joseph M; Ma, Jiong; Dong, Biao et al. (2015) Super-resolution imaging of nuclear import of adeno-associated virus in live cells. Mol Ther Methods Clin Dev 2:15047
Mi, Lan; Goryaynov, Alexander; Lindquist, Andre et al. (2015) Quantifying nucleoporin stoichiometry inside single nuclear pore complexes in vivo. Sci Rep 5:9372
Goryaynov, Alexander; Yang, Weidong (2014) Role of molecular charge in nucleocytoplasmic transport. PLoS One 9:e88792

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