The clinical incidence of infections caused by drug-resistant Gram-negative bacteria has increased dramatically in recent decades, especially for hospital-acquired infections. These infections can be essentially untreatable, leading to significant morbidity and mortality, as well as a high financial burden. Antimicrobial peptides (AMP) that target the microbial membrane directly have long been a promising but unfulfilled treatment alternative for drug-resistant, Gram-negative bacterial infections. But known AMPs have one or more of the following limitations to clinical usefulness: low solubility, residual toxicity, loss of effectiveness in the presence of concentrated host cells, and rapid degradation in plasma. In the proposed work, we will identify membrane targeting AMPs that circumvent all of the roadblocks to clinically useful activity. In the R21 portion we will identify gain-of-functin AMPs against Gram negative bacteria using screening of a validated iterative combinatorial peptide library that was based on a known AMP as a design template. We will complete the screening assay in which microbicidal activity is measured in the presence of highly concentrated human erythrocytes to mimic concentrated host cells encountered by peptides in vivo. If the hits identified satisfy our stringent milestones, we will progress to the R33 phase, performing extensive characterization of the selected hits. With this novel approach we will decipher the fundamental principles of useful AMP activity, and identify clinically-useful antimicrobial peptides that (1) are less than 15 residues long, and are linear and compositionally simple; (2) have broad- spectrum sterilizing antimicrobial activity against drug-resistant Gram negative bacteria at microM peptide in plasma and in the presence of concentrated host cells; (3) have little residual toxicity to human cells at high peptide concentration; (4) are highly soluble, and (5) are chemically stable in blood and plasma. Peptides with these properties will allow us to successfully exploit the bacterial plasma membrane as a novel target for drug-resistant bacterial infections.

Public Health Relevance

Increasingly, drug resistant Gram-negative bacteria are causing morbidity and mortality, especially in health care settings, but in the community, also. Infections by these organisms will continue to be essentially untreatable until novel classes of antibiotics can be identified. In this work, clinically useful antimicrobial peptides will be developed that target the microbial membrane, and that specifically bypass all of the barriers to clinical utility.

Agency
National Institute of Health (NIH)
Institute
National Institute of Allergy and Infectious Diseases (NIAID)
Type
Exploratory/Developmental Grants (R21)
Project #
1R21AI119104-01
Application #
8953183
Study Section
Special Emphasis Panel (ZAI1)
Program Officer
Xu, Zuoyu
Project Start
2015-07-01
Project End
2017-06-30
Budget Start
2015-07-01
Budget End
2016-06-30
Support Year
1
Fiscal Year
2015
Total Cost
Indirect Cost
Name
Tulane University
Department
Biochemistry
Type
Schools of Medicine
DUNS #
053785812
City
New Orleans
State
LA
Country
United States
Zip Code
70118
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He, Jing; Melnik, Lilia I; Komin, Alexander et al. (2017) Ebola Virus Delta Peptide is a Viroporin. J Virol :
Starr, Charles G; Wimley, William C (2017) Antimicrobial peptides are degraded by the cytosolic proteases of human erythrocytes. Biochim Biophys Acta Biomembr 1859:2319-2326
Starr, Charles G; He, Jing; Wimley, William C (2016) Host Cell Interactions Are a Significant Barrier to the Clinical Utility of Peptide Antibiotics. ACS Chem Biol 11:3391-3399
He, Jing; Starr, Charles G; Wimley, William C (2015) A lack of synergy between membrane-permeabilizing cationic antimicrobial peptides and conventional antibiotics. Biochim Biophys Acta 1848:8-15
Wimley, William C (2015) Determining the Effects of Membrane-Interacting Peptides on Membrane Integrity. Methods Mol Biol 1324:89-106