MicroRNA (miRNA) control has recently emerged as a critical regulator of gene expression and protein synthesis, affecting homeostasis, health and disease. No information is available on the differential occurrence of miRNAs in the gingival tissues in various states of periodontal health and disease, on the cell sub- populations that express these miRNAs, or on the functional implications of these short RNA sequences. In our earlier work supported by NICDR, we have collected specimens from clinically healthy and diseased gingival tissues from patients with chronic or aggressive periodontitis, and have studied the gingival tissue transcriptome and its association with clinical, microbiological and serological markers of periodontitis. In the first phase of the current proposal, we intent to utilize 242 available archived tissue specimens from the above study, obtained from a subset of 101 thoroughly phenotyped patients (53 with chronic and 48 with aggressive periodontitis), to examine the occurrence of miRNAs in the gingival tissues in states of periodontal health and disease and in different types of periodontal lesions. Next, we will use bio-informatics approaches to identify potential gene targets to which the identified miRNAs bind preferentially, and will validate in our own full- genome transcriptomic database whether these predicted targets were indeed down-regulated in the gingiva. We will subsequently harvest gingival tissues from de novo recruited individuals, we will identify the specific cell populations that account for the miRNAs found in the previous step to be differentially expressed in whole tissue lysates, and will confirm whether their target genes are also repressed in these cell types. Lastly, we will use a novel miRNA inhibition approach in appropriate cell culture models to begin to functionally characterize the identified miRNA sequences. The proposed studies will address a significant gap in knowledge in a cost-effective manner and in a short period of time, and will advance our understanding of the pathobiology of periodontal diseases.

Public Health Relevance

Relevance MicroRNAs have been shown to be important epigenetic regulators of gene and protein expression. This project will examine the expression of miRNAs in gingival tissues and their cellular components in various states of periodontal health and disease. We will further validate the identified miRNAs'gene targets and examine their potential functions in in vitro studies. Our data will ultimately contribute to a better understanding of the pathobiology of periodontal diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of Dental & Craniofacial Research (NIDCR)
Type
Exploratory/Developmental Grants (R21)
Project #
1R21DE021820-01A1
Application #
8241592
Study Section
Oral, Dental and Craniofacial Sciences Study Section (ODCS)
Program Officer
Lumelsky, Nadya L
Project Start
2011-12-01
Project End
2013-11-30
Budget Start
2011-12-01
Budget End
2012-11-30
Support Year
1
Fiscal Year
2012
Total Cost
$240,000
Indirect Cost
$90,000
Name
Columbia University (N.Y.)
Department
Dentistry
Type
Schools of Dentistry
DUNS #
621889815
City
New York
State
NY
Country
United States
Zip Code
10032
Kebschull, M; Demmer, R T; GrĂ¼n, B et al. (2014) Gingival tissue transcriptomes identify distinct periodontitis phenotypes. J Dent Res 93:459-68
Nowak, Michael; Kramer, Benjamin; Haupt, Manuela et al. (2013) Activation of invariant NK T cells in periodontitis lesions. J Immunol 190:2282-91
Kebschull, M; Guarnieri, P; Demmer, R T et al. (2013) Molecular differences between chronic and aggressive periodontitis. J Dent Res 92:1081-8
Kramer, Benjamin; Kebschull, Moritz; Nowak, Michael et al. (2013) Role of the NK cell-activating receptor CRACC in periodontitis. Infect Immun 81:690-6