It is known that de novo microdeletions play a role in the susceptibility of neuropsychiatric traits such as schizophrenia and autism. However, the majority of the genomic variation (including microdeletions) is inherited and does not represent de novo events. Evidence from large studies, however, points to a higher incidence of rare genomic deletions in patients, while we know that the same variants may also be present in unaffected subjects including relatives of patients. Our own findings suggest that there are cases in which large genomic deletions may uncover recessive, functional variants at the remaining allele. We hypothesize that the non-deleted alleles in schizophrenia patients may be enriched with variants affecting gene function compared to non-deleted alleles present in unaffected subjects. To explore this further, we will collect sequence data of coding regions of genes that are affected by genomic deletions in 250 schizophrenia cases and 250 unaffected controls for which copy number variation data is available.

Public Health Relevance

Schizophrenia is a heritable disease but little is known about which genes play important roles in disease susceptibility. This study explores the rate of rare DNA mutations affecting gene function in patients versus unaffected individuals.

Agency
National Institute of Health (NIH)
Institute
National Institute of Mental Health (NIMH)
Type
Exploratory/Developmental Grants (R21)
Project #
1R21MH092783-01
Application #
8032372
Study Section
Behavioral Genetics and Epidemiology Study Section (BGES)
Program Officer
Meinecke, Douglas L
Project Start
2011-09-05
Project End
2013-06-30
Budget Start
2011-09-05
Budget End
2012-06-30
Support Year
1
Fiscal Year
2011
Total Cost
$192,500
Indirect Cost
Name
University of California Los Angeles
Department
Type
Schools of Medicine
DUNS #
092530369
City
Los Angeles
State
CA
Country
United States
Zip Code
90095
Loohuis, Loes M Olde; Vorstman, Jacob A S; Ori, Anil P et al. (2015) Genome-wide burden of deleterious coding variants increased in schizophrenia. Nat Commun 6:7501