Electron-transfer (ET) reactions, the simplest chemical processes, pervade biology. Photosynthesis, respiration, nitrogen fixation, drug metabolism, DNA synthesis, and immune response represent a small subset of the scores of biological processes in which ET reactions play pivotal roles. Any effort to understand the relationship between structure and function in redox enzymes rests on an understanding of long-range ET in proteins. Prior theoretical and experimental work indicates that different protein secondary-structure types mediate long-range ET with markedly different efficiencies. We will perform systematic measurements of the distance and deuterium isotope dependencies of ET rates on beta-sheet (azurin, amicyanin, soluble Cu(a) and alpha-helical (cytochrome b(562) proteins in order to define the long range ET efficiencies and the role of hydrogen bonds in these two structures. Theoretical models indicate that the efficiency of long-range ET depends on the relative energies of the electronic states of the redox sites and the protein matrix (polypeptide). There has never been a clear experimental demonstration of this so-called tunneling-energy dependence, yet the predicted effects can be quite significant. The role of tunneling energy in long-range ET will be evaluated in studies of the distance dependencies of ET rates in several proteins as functions of acceptor reduction potential. Metal complexes frequently serve as redox sites in electron-transfer proteins. Long-range ET depends on the efficiency of coupling these redox sites to the intervening polypeptide. Owing to varied metal-ligand interactions, this coupling can be highly anisotropic. The effects of these disparate ligand couplings will be examined in ET studies of several active-site mutants of the copper protein azurin. Many biological redox reactions are accompanied by significant changes in protein conformation. A common example in metalloproteins is the gain or loss of a ligand at the active site upon change in metal oxidation state. The kinetic consequences of a redox-coupled coordination change will be examined in ET studies of the copper protein amicyanin.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Method to Extend Research in Time (MERIT) Award (R37)
Project #
5R37DK019038-20
Application #
2733968
Study Section
Metallobiochemistry Study Section (BMT)
Program Officer
Laughlin, Maren R
Project Start
1979-05-01
Project End
2001-06-30
Budget Start
1998-09-22
Budget End
1999-06-30
Support Year
20
Fiscal Year
1998
Total Cost
Indirect Cost
Name
California Institute of Technology
Department
Type
Schools of Engineering
DUNS #
078731668
City
Pasadena
State
CA
Country
United States
Zip Code
91125
Warren, Jeffrey J; Shafaat, Oliver S; Winkler, Jay R et al. (2016) Proton-coupled electron hopping in Ru-modified P. aeruginosa azurin. J Biol Inorg Chem 21:113-9
Kozak, John J; Gray, Harry B; Garza-López, Roberto A (2016) Cytochrome unfolding pathways from computational analysis of crystal structures. J Inorg Biochem 155:44-55
Winkler, Jay R; Gray, Harry B (2015) Could tyrosine and tryptophan serve multiple roles in biological redox processes? Philos Trans A Math Phys Eng Sci 373:
Gray, Harry B; Warren, Jeffery J; Winkler, Jay R et al. (2014) A Euclidean perspective on the unfolding of azurin: chain motion. J Biol Inorg Chem 19:555-63
Pospíšil, Petr; Luxem, Katja E; Ener, Maraia et al. (2014) Fluorescence quenching of (dimethylamino)naphthalene dyes Badan and Prodan by tryptophan in cytochromes P450 and micelles. J Phys Chem B 118:10085-91
Winkler, Jay R; Gray, Harry B (2014) Long-range electron tunneling. J Am Chem Soc 136:2930-9
Yamada, Seiji; Bouley Ford, Nicole D; Keller, Gretchen E et al. (2013) Snapshots of a protein folding intermediate. Proc Natl Acad Sci U S A 110:1606-10
Takematsu, Kana; Williamson, Heather; Blanco-Rodríguez, Ana María et al. (2013) Tryptophan-accelerated electron flow across a protein-protein interface. J Am Chem Soc 135:15515-25
Cable, Morgan L; Kirby, James P; Gray, Harry B et al. (2013) Enhancement of anion binding in lanthanide optical sensors. Acc Chem Res 46:2576-84
Warren, Jeffrey J; Herrera, Nadia; Hill, Michael G et al. (2013) Electron flow through nitrotyrosinate in Pseudomonas aeruginosa azurin. J Am Chem Soc 135:11151-8

Showing the most recent 10 out of 81 publications